Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC117522.2-201ENST00000510049 657 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RPL23AP94-201ENST00000512518 302 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RNA5SP148-201ENST00000516527 94 ntBASIC3.1□□□□□ -1.91
MBD4O95243 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.1□□□□□ -1.91
MBD4O95243 BTF3P12-201ENST00000519620 469 ntBASIC3.1□□□□□ -1.91
MBD4O95243 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MBD4O95243 HSPE1P20-201ENST00000538133 289 ntBASIC3.1□□□□□ -1.91
MBD4O95243 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.1□□□□□ -1.91
MBD4O95243 AC092325.1-201ENST00000566449 554 ntBASIC3.1□□□□□ -1.91
MBD4O95243 AC008945.2-201ENST00000606056 604 ntBASIC3.1□□□□□ -1.91
MBD4O95243 AC097065.2-201ENST00000608159 533 ntBASIC3.1□□□□□ -1.91
MBD4O95243 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.1□□□□□ -1.91
MBD4O95243 MIR7157-201ENST00000635801 60 ntBASIC3.1□□□□□ -1.91
MBD4O95243 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.1□□□□□ -1.91
MBD4O95243 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MBD4O95243 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
MBD4O95243 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MBD4O95243 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MBD4O95243 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.09□□□□□ -1.91
MBD4O95243 SNORD3E-201ENST00000362899 217 ntBASIC3.09□□□□□ -1.91
MBD4O95243 RNU6-371P-201ENST00000364283 108 ntBASIC3.09□□□□□ -1.91
MBD4O95243 RNA5SP210-201ENST00000391034 120 ntBASIC3.09□□□□□ -1.91
MBD4O95243 U3.37-201ENST00000408528 213 ntBASIC3.09□□□□□ -1.91
MBD4O95243 RNU4-46P-201ENST00000410818 138 ntBASIC3.09□□□□□ -1.91
MBD4O95243 MTATP6P18-201ENST00000417994 673 ntBASIC3.09□□□□□ -1.91
MBD4O95243 USP9YP20-201ENST00000419224 558 ntBASIC3.09□□□□□ -1.91
MBD4O95243 AC073464.1-201ENST00000429823 534 ntBASIC3.09□□□□□ -1.91
MBD4O95243 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD4O95243 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.09□□□□□ -1.91
MBD4O95243 AL360271.2-201ENST00000447710 161 ntBASIC3.09□□□□□ -1.91
MBD4O95243 AL162395.1-201ENST00000457882 422 ntBASIC3.09□□□□□ -1.91
MBD4O95243 GMFBP1-201ENST00000467831 427 ntBASIC3.09□□□□□ -1.91
MBD4O95243 RPS3AP17-201ENST00000472594 777 ntBASIC3.09□□□□□ -1.91
MBD4O95243 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.09□□□□□ -1.91
MBD4O95243 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.09□□□□□ -1.91
MBD4O95243 AC098799.2-201ENST00000509466 868 ntBASIC3.09□□□□□ -1.91
MBD4O95243 AC114781.4-201ENST00000513707 639 ntBASIC3.09□□□□□ -1.91
MBD4O95243 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD4O95243 AC090616.3-201ENST00000582184 217 ntBASIC3.09□□□□□ -1.91
MBD4O95243 MIR3117-201ENST00000584034 78 ntBASIC3.09□□□□□ -1.91
MBD4O95243 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD4O95243 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD4O95243 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD4O95243 AC092656.1-203ENST00000624134 423 ntBASIC3.09□□□□□ -1.91
MBD4O95243 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
MBD4O95243 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.08□□□□□ -1.92
MBD4O95243 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
MBD4O95243 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
MBD4O95243 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
MBD4O95243 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD4O95243 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MBD4O95243 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.08□□□□□ -1.92
MBD4O95243 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MBD4O95243 Y_RNA.296-201ENST00000364930 108 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RNU6-1029P-201ENST00000384109 107 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RNU6-1103P-201ENST00000384150 107 ntBASIC3.08□□□□□ -1.92
MBD4O95243 MIR10A-201ENST00000385043 110 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RPL21P75-201ENST00000396599 483 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RPL21P28-201ENST00000401418 483 ntBASIC3.08□□□□□ -1.92
MBD4O95243 AL592114.1-201ENST00000403842 483 ntBASIC3.08□□□□□ -1.92
MBD4O95243 GSTA9P-201ENST00000406231 611 ntBASIC3.08□□□□□ -1.92
MBD4O95243 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
MBD4O95243 AL663109.1-201ENST00000411498 844 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RPL21P90-201ENST00000415692 466 ntBASIC3.08□□□□□ -1.92
MBD4O95243 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.08□□□□□ -1.92
MBD4O95243 AL445687.1-201ENST00000439946 251 ntBASIC3.08□□□□□ -1.92
MBD4O95243 TPT1P7-201ENST00000458300 517 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RPL21P39-201ENST00000463605 483 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RPL21P93-201ENST00000480465 489 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RN7SL297P-201ENST00000483161 293 ntBASIC3.08□□□□□ -1.92
MBD4O95243 AC087190.1-201ENST00000484462 480 ntBASIC3.08□□□□□ -1.92
MBD4O95243 AC093591.1-201ENST00000491435 481 ntBASIC3.08□□□□□ -1.92
MBD4O95243 RPL21P16-201ENST00000495531 483 ntBASIC3.08□□□□□ -1.92
MBD4O95243 HMGB1P29-201ENST00000505659 499 ntBASIC3.08□□□□□ -1.92
MBD4O95243 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.08□□□□□ -1.92
MBD4O95243 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD4O95243 RNA5SP320-201ENST00000516263 124 ntBASIC3.08□□□□□ -1.92
MBD4O95243 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD4O95243 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD4O95243 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
MBD4O95243 AL356280.1-201ENST00000603614 379 ntBASIC3.08□□□□□ -1.92
MBD4O95243 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
MBD4O95243 AC243829.7-201ENST00000633081 225 ntBASIC3.08□□□□□ -1.92
MBD4O95243 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.08□□□□□ -1.92
MBD4O95243 AC080128.1-201ENST00000474389 1917 ntBASIC3.08□□□□□ -1.92
MBD4O95243 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.08□□□□□ -1.92
MBD4O95243 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
MBD4O95243 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MBD4O95243 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD4O95243 RNU6-1328P-201ENST00000410938 106 ntBASIC3.07□□□□□ -1.92
MBD4O95243 AC016831.2-201ENST00000417179 352 ntBASIC3.07□□□□□ -1.92
MBD4O95243 RPS15AP9-201ENST00000439856 381 ntBASIC3.07□□□□□ -1.92
MBD4O95243 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD4O95243 MTND1P18-201ENST00000448191 573 ntBASIC3.07□□□□□ -1.92
MBD4O95243 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD4O95243 MTAPP1-201ENST00000489154 819 ntBASIC3.07□□□□□ -1.92
MBD4O95243 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.07□□□□□ -1.92
MBD4O95243 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.07□□□□□ -1.92
MBD4O95243 AC104136.1-201ENST00000512969 394 ntBASIC3.07□□□□□ -1.92
MBD4O95243 AC024909.2-201ENST00000553035 286 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms