Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC092807.2-201ENST00000609367 243 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC010378.1-201ENST00000619270 362 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC092628.2-201ENST00000622492 339 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 SNORA50A-202ENST00000629536 136 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC121333.1-201ENST00000567488 2709 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-2O95096 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-2O95096 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-2O95096 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
NKX2-2O95096 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.84□□□□□ -1.95
NKX2-2O95096 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-2O95096 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.84□□□□□ -1.95
NKX2-2O95096 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 RNU6-1280P-201ENST00000365211 107 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 SNORD67-201ENST00000390833 111 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.84□□□□□ -1.95
NKX2-2O95096 SNORA11-201ENST00000408789 128 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX2-2O95096 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.84□□□□□ -1.95
NKX2-2O95096 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.84□□□□□ -1.95
NKX2-2O95096 PGBD4P6-201ENST00000421501 610 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX2-2O95096 TOMM20P4-201ENST00000427861 435 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.84□□□□□ -1.95
NKX2-2O95096 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX2-2O95096 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX2-2O95096 UQCRHP3-201ENST00000451503 251 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.84□□□□□ -1.95
NKX2-2O95096 AC233279.1-201ENST00000455300 423 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 RPL7P49-201ENST00000471402 708 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 RN7SL504P-201ENST00000494496 287 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.84□□□□□ -1.95
NKX2-2O95096 RNU6-581P-201ENST00000516214 105 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 RNU6-1038P-201ENST00000516516 104 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 Y_RNA.687-201ENST00000516558 91 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.84□□□□□ -1.95
NKX2-2O95096 AC093331.1-201ENST00000521474 169 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AP004607.1-201ENST00000524456 203 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 CYCSP27-201ENST00000527643 293 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.84□□□□□ -1.95
NKX2-2O95096 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.84□□□□□ -1.95
NKX2-2O95096 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.84□□□□□ -1.95
NKX2-2O95096 SRGNP1-201ENST00000603392 451 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AC092747.3-201ENST00000603769 301 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AL035413.2-201ENST00000604801 525 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 AC002044.1-201ENST00000606707 158 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 MIR92B-201ENST00000607575 96 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.84□□□□□ -1.95
NKX2-2O95096 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 Z69720.2-201ENST00000624755 279 ntBASIC2.84□□□□□ -1.95
NKX2-2O95096 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.84□□□□□ -1.95
NKX2-2O95096 MTND5P1-201ENST00000445440 1375 ntBASIC2.84□□□□□ -1.96
NKX2-2O95096 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-2O95096 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-2O95096 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC073325.2-201ENST00000339545 159 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 RNU6-942P-201ENST00000363002 107 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 RPL21P3-201ENST00000395517 478 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-2O95096 AL122016.1-201ENST00000403365 367 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 RNA5SP274-201ENST00000410484 108 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.83□□□□□ -1.96
NKX2-2O95096 RPL7P10-201ENST00000417407 739 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 HIGD1AP2-201ENST00000446367 280 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC146507.2-201ENST00000460608 476 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC006483.1-201ENST00000487308 313 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 SNORA14.1-201ENST00000516113 141 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC011471.1-201ENST00000585766 187 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-2O95096 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX2-2O95096 MIR3662-201ENST00000637030 95 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX2-2O95096 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NKX2-2O95096 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-2O95096 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 AC004944.1-201ENST00000517807 3059 ntBASIC2.83□□□□□ -1.96
NKX2-2O95096 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX2-2O95096 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NKX2-2O95096 AL035425.3-201ENST00000564206 4996 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms