Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.88□□□□□ -1.95
ZIC3O60481 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
ZIC3O60481 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ZIC3O60481 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.88□□□□□ -1.95
ZIC3O60481 Y_RNA.184-201ENST00000363884 108 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
ZIC3O60481 AL122016.1-201ENST00000403365 367 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 RPL31P12-201ENST00000422587 358 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.88□□□□□ -1.95
ZIC3O60481 AL353729.1-201ENST00000425044 720 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AL365400.1-201ENST00000431854 640 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.88□□□□□ -1.95
ZIC3O60481 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.88□□□□□ -1.95
ZIC3O60481 MTND4LP16-201ENST00000440828 295 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AC093019.1-201ENST00000443135 252 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 MRPL50P4-201ENST00000446432 475 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AC006539.3-201ENST00000454258 129 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AC233279.1-201ENST00000455300 423 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AMD1P1-201ENST00000457220 922 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 RPS27AP10-201ENST00000496103 208 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AC103851.1-201ENST00000506833 274 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.88□□□□□ -1.95
ZIC3O60481 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.88□□□□□ -1.95
ZIC3O60481 RNU6-256P-201ENST00000516747 97 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 RNU6-1183P-201ENST00000517054 60 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.88□□□□□ -1.95
ZIC3O60481 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
ZIC3O60481 AL391261.3-201ENST00000557194 520 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 CYCSP39-201ENST00000565821 309 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.88□□□□□ -1.95
ZIC3O60481 AC012493.2-201ENST00000595083 291 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 C8orf59P2-201ENST00000603441 271 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 AL645944.1-201ENST00000603857 493 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 APOOP1-201ENST00000604695 592 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 uc_338.5-201ENST00000611839 155 ntBASIC2.88□□□□□ -1.95
ZIC3O60481 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZIC3O60481 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 SRP72P2-201ENST00000344851 1979 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
ZIC3O60481 Y_RNA.135-201ENST00000363439 95 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 Y_RNA.212-201ENST00000364177 102 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.87□□□□□ -1.95
ZIC3O60481 RNU6-1013P-201ENST00000384180 107 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 SNORA7.4-201ENST00000384249 137 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 MIR10A-201ENST00000385043 110 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 VN1R36P-201ENST00000414936 291 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.87□□□□□ -1.95
ZIC3O60481 AL714022.1-201ENST00000439897 151 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 PPP1R2P5-201ENST00000457256 603 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 HMGN1P18-201ENST00000457642 277 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 snoU13.28-201ENST00000459235 104 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 RPS29P20-201ENST00000489592 171 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.87□□□□□ -1.95
ZIC3O60481 FGF7P4-201ENST00000509595 295 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 Y_RNA.691-201ENST00000516611 103 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 RNU6-1088P-201ENST00000516850 104 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 RNU6-323P-201ENST00000521915 107 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ZIC3O60481 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 AC037471.2-201ENST00000564941 598 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 RPS3AP23-202ENST00000574601 686 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.87□□□□□ -1.95
ZIC3O60481 MIR4474-201ENST00000579189 78 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AL670379.10-201ENST00000604330 253 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AL670379.9-201ENST00000605428 253 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 uc_338.25-201ENST00000613756 156 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AC009233.1-201ENST00000616477 371 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 AC073308.1-201ENST00000623696 305 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AC091903.1-201ENST00000624322 454 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 TPTEP1-208ENST00000636884 213 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 U6.99-201ENST00000637524 83 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 MIR7153-201ENST00000637758 57 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 AC010680.1-201ENST00000590024 3590 ntBASIC2.87□□□□□ -1.95
ZIC3O60481 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
ZIC3O60481 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
ZIC3O60481 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.86□□□□□ -1.95
ZIC3O60481 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
ZIC3O60481 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZIC3O60481 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ZIC3O60481 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ZIC3O60481 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
ZIC3O60481 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZIC3O60481 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.86□□□□□ -1.95
ZIC3O60481 AC138393.1-203ENST00000327086 343 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 RNU1-75P-201ENST00000347264 129 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 RNA5SP374-201ENST00000362939 125 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 RNU6-658P-201ENST00000384606 106 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 MIR491-201ENST00000384877 84 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 AL356057.2-201ENST00000403318 432 ntBASIC2.86□□□□□ -1.95
ZIC3O60481 NDUFS5P4-201ENST00000412983 318 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms