Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL445529.1-201ENST00000398713 389 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.27□□□□□ -1.73
SRGAP3O43295 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.27□□□□□ -1.73
SRGAP3O43295 CKS1BP5-201ENST00000434172 273 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 AL590399.6-201ENST00000446396 307 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 SUMO1P2-201ENST00000452524 304 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 MTND3P25-201ENST00000509243 135 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 GMPSP1-201ENST00000514075 579 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.27□□□□□ -1.73
SRGAP3O43295 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.27□□□□□ -1.73
SRGAP3O43295 Z98751.3-201ENST00000604447 521 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 HMGN2P28-201ENST00000606102 262 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 AC069200.1-201ENST00000609511 323 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 MIR8062-201ENST00000621515 85 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 MIR4275-201ENST00000636486 87 ntBASIC4.27□□□□□ -1.73
SRGAP3O43295 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRGAP3O43295 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.27□□□□□ -1.73
SRGAP3O43295 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRGAP3O43295 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.27□□□□□ -1.73
SRGAP3O43295 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SRGAP3O43295 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.27□□□□□ -1.73
SRGAP3O43295 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRGAP3O43295 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRGAP3O43295 PRO1804-201ENST00000623780 2050 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SRGAP3O43295 AL450326.2-201ENST00000421913 1962 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 Y_RNA.48-201ENST00000362710 103 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 Y_RNA.461-201ENST00000384263 103 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 RNU6-1026P-201ENST00000384465 108 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AL603908.1-201ENST00000406098 201 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 MIR1252-201ENST00000408861 65 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 RN7SKP111-201ENST00000410349 271 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.26□□□□□ -1.73
SRGAP3O43295 AL133396.1-201ENST00000432048 687 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.26□□□□□ -1.73
SRGAP3O43295 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.26□□□□□ -1.73
SRGAP3O43295 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRGAP3O43295 AC011005.2-201ENST00000487324 359 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 RPL17P19-201ENST00000489069 552 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AC026784.1-201ENST00000507986 352 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.26□□□□□ -1.73
SRGAP3O43295 RNU6-914P-201ENST00000516749 109 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 Y_RNA.715-201ENST00000517082 110 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.26□□□□□ -1.73
SRGAP3O43295 AC005951.2-201ENST00000576282 495 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 OR1M4P-201ENST00000589199 287 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AC024220.1-201ENST00000603675 484 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AL160281.1-201ENST00000605307 311 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 AL031601.2-202ENST00000622650 282 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRGAP3O43295 AL049781.1-201ENST00000623195 3585 ntBASIC4.26□□□□□ -1.73
SRGAP3O43295 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.26□□□□□ -1.73
SRGAP3O43295 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRGAP3O43295 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRGAP3O43295 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SRGAP3O43295 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SRGAP3O43295 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SRGAP3O43295 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.25□□□□□ -1.73
SRGAP3O43295 RNA5SP197-201ENST00000363357 119 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 RNU1-33P-201ENST00000364249 162 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 RNU6-371P-201ENST00000364283 108 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 MIR578-201ENST00000384828 96 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 RPS15AP6-201ENST00000420703 385 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 RPL23AP31-201ENST00000456160 467 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.25□□□□□ -1.73
SRGAP3O43295 AC034236.1-201ENST00000469891 373 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 SNORA31.3-201ENST00000516029 96 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 RNU2-53P-201ENST00000516257 147 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 SNORA70.19-201ENST00000516717 90 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.25□□□□□ -1.73
SRGAP3O43295 SNRPGP16-201ENST00000533275 226 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 HMGB3P26-201ENST00000560051 582 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 MIR548AC-201ENST00000585049 88 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 AL138825.1-201ENST00000618587 192 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 MIR7975-201ENST00000619350 68 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 SNORD39.4-201ENST00000620099 78 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 MIR4272-201ENST00000635924 64 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 AL513302.2-201ENST00000562313 1842 ntBASIC4.25□□□□□ -1.73
SRGAP3O43295 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SRGAP3O43295 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SRGAP3O43295 AL356274.2-201ENST00000624379 3752 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SRGAP3O43295 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SRGAP3O43295 RNY3P11-201ENST00000364153 102 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 Y_RNA.552-201ENST00000384665 112 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 AP000907.1-201ENST00000428428 510 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 ARL5AP4-201ENST00000430731 512 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.24□□□□□ -1.73
SRGAP3O43295 AL360271.2-201ENST00000447710 161 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 CHEK2P4-201ENST00000450340 246 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 snoU13.3-201ENST00000459441 104 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.24□□□□□ -1.73
SRGAP3O43295 AC093663.1-201ENST00000497190 394 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 FCF1P8-201ENST00000510322 597 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 RNU6-408P-201ENST00000515910 100 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 RNU6-1231P-201ENST00000517185 103 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 IGHV3-76-201ENST00000522465 295 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.24□□□□□ -1.73
SRGAP3O43295 AC040926.1-201ENST00000530195 238 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms