Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FABP5P15-201ENST00000453566 214 ntBASIC2.73□□□□□ -1.97
O00370 RNU7-63P-201ENST00000459054 62 ntBASIC2.73□□□□□ -1.97
O00370 RPL36AP51-201ENST00000487216 318 ntBASIC2.73□□□□□ -1.97
O00370 EIF4EP3-201ENST00000498782 656 ntBASIC2.73□□□□□ -1.97
O00370 SNORA31.18-201ENST00000517043 134 ntBASIC2.73□□□□□ -1.97
O00370 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.73□□□□□ -1.97
O00370 CKS1BP7-201ENST00000522230 235 ntBASIC2.73□□□□□ -1.97
O00370 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.73□□□□□ -1.97
O00370 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.73□□□□□ -1.97
O00370 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.73□□□□□ -1.97
O00370 AC027807.1-201ENST00000559921 996 ntBASIC2.73□□□□□ -1.97
O00370 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.73□□□□□ -1.97
O00370 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.73□□□□□ -1.97
O00370 AC024940.5-201ENST00000622889 474 ntBASIC2.73□□□□□ -1.97
O00370 U6.99-201ENST00000637524 83 ntBASIC2.73□□□□□ -1.97
O00370 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
O00370 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.73□□□□□ -1.97
O00370 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
O00370 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.72□□□□□ -1.97
O00370 RNU4-48P-201ENST00000365559 182 ntBASIC2.72□□□□□ -1.97
O00370 SNORA4.3-201ENST00000365564 137 ntBASIC2.72□□□□□ -1.97
O00370 RNU6-1215P-201ENST00000384441 102 ntBASIC2.72□□□□□ -1.97
O00370 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
O00370 AC007560.1-201ENST00000426912 237 ntBASIC2.72□□□□□ -1.97
O00370 MTCO2P19-201ENST00000427513 598 ntBASIC2.72□□□□□ -1.97
O00370 MTND1P1-201ENST00000445453 368 ntBASIC2.72□□□□□ -1.97
O00370 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.72□□□□□ -1.97
O00370 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.72□□□□□ -1.97
O00370 RNU7-182P-201ENST00000459009 62 ntBASIC2.72□□□□□ -1.97
O00370 SRIP1-201ENST00000489235 288 ntBASIC2.72□□□□□ -1.97
O00370 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.72□□□□□ -1.97
O00370 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
O00370 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.72□□□□□ -1.97
O00370 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.72□□□□□ -1.97
O00370 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.72□□□□□ -1.97
O00370 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
O00370 AC016957.1-201ENST00000534895 309 ntBASIC2.72□□□□□ -1.97
O00370 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.72□□□□□ -1.97
O00370 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.72□□□□□ -1.97
O00370 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
O00370 RPL12P50-201ENST00000603116 116 ntBASIC2.72□□□□□ -1.97
O00370 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.72□□□□□ -1.97
O00370 AC092608.2-201ENST00000624427 218 ntBASIC2.72□□□□□ -1.97
O00370 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
O00370 AC135776.4-201ENST00000624300 1904 ntBASIC2.72□□□□□ -1.97
O00370 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
O00370 RNU6-1120P-201ENST00000362988 108 ntBASIC2.71□□□□□ -1.98
O00370 SNORD115-7-201ENST00000365306 82 ntBASIC2.71□□□□□ -1.98
O00370 Y_RNA.372-201ENST00000365599 102 ntBASIC2.71□□□□□ -1.98
O00370 MIR301A-201ENST00000385261 86 ntBASIC2.71□□□□□ -1.98
O00370 RNA5SP181-201ENST00000410246 98 ntBASIC2.71□□□□□ -1.98
O00370 RNU6-1025P-201ENST00000410629 104 ntBASIC2.71□□□□□ -1.98
O00370 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
O00370 AL353193.1-201ENST00000421444 268 ntBASIC2.71□□□□□ -1.98
O00370 AL353729.1-201ENST00000425044 720 ntBASIC2.71□□□□□ -1.98
O00370 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.71□□□□□ -1.98
O00370 MTND1P18-201ENST00000448191 573 ntBASIC2.71□□□□□ -1.98
O00370 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.71□□□□□ -1.98
O00370 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
O00370 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.71□□□□□ -1.98
O00370 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.71□□□□□ -1.98
O00370 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.71□□□□□ -1.98
O00370 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.71□□□□□ -1.98
O00370 SNORD27.1-201ENST00000516319 72 ntBASIC2.71□□□□□ -1.98
O00370 RNU6-1315P-201ENST00000517187 99 ntBASIC2.71□□□□□ -1.98
O00370 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.71□□□□□ -1.98
O00370 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
O00370 AC008521.1-201ENST00000587471 187 ntBASIC2.71□□□□□ -1.98
O00370 AC104237.2-201ENST00000612456 443 ntBASIC2.71□□□□□ -1.98
O00370 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.71□□□□□ -1.98
O00370 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
O00370 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
O00370 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
O00370 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
O00370 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
O00370 SNORD37.1-201ENST00000390968 65 ntBASIC2.7□□□□□ -1.98
O00370 RNU6-780P-201ENST00000391030 104 ntBASIC2.7□□□□□ -1.98
O00370 MTCO3P40-201ENST00000392516 676 ntBASIC2.7□□□□□ -1.98
O00370 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
O00370 AL513475.1-201ENST00000406602 315 ntBASIC2.7□□□□□ -1.98
O00370 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.7□□□□□ -1.98
O00370 AL160275.3-201ENST00000423876 471 ntBASIC2.7□□□□□ -1.98
O00370 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.7□□□□□ -1.98
O00370 RPL7P54-201ENST00000438336 674 ntBASIC2.7□□□□□ -1.98
O00370 RPS12P2-201ENST00000439728 269 ntBASIC2.7□□□□□ -1.98
O00370 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.7□□□□□ -1.98
O00370 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.7□□□□□ -1.98
O00370 SRRM1P2-201ENST00000464531 1192 ntBASIC2.7□□□□□ -1.98
O00370 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.7□□□□□ -1.98
O00370 AC109927.2-201ENST00000506416 303 ntBASIC2.7□□□□□ -1.98
O00370 RNU6-720P-201ENST00000516363 108 ntBASIC2.7□□□□□ -1.98
O00370 RNU6-506P-201ENST00000516553 94 ntBASIC2.7□□□□□ -1.98
O00370 RNA5SP402-201ENST00000517148 110 ntBASIC2.7□□□□□ -1.98
O00370 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.7□□□□□ -1.98
O00370 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.7□□□□□ -1.98
O00370 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.7□□□□□ -1.98
O00370 AL359212.1-201ENST00000556608 614 ntBASIC2.7□□□□□ -1.98
O00370 AL157871.3-201ENST00000557231 293 ntBASIC2.7□□□□□ -1.98
O00370 AC008752.3-201ENST00000588113 712 ntBASIC2.7□□□□□ -1.98
O00370 AC068790.6-201ENST00000602558 258 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms