Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.95□□□□□ -2.1
AP3B1O00203 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.95□□□□□ -2.1
AP3B1O00203 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.95□□□□□ -2.1
AP3B1O00203 UBE2DNL-203ENST00000474922 222 ntBASIC1.95□□□□□ -2.1
AP3B1O00203 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
AP3B1O00203 RNU2-53P-201ENST00000516257 147 ntBASIC1.95□□□□□ -2.1
AP3B1O00203 RNU6-914P-201ENST00000516749 109 ntBASIC1.95□□□□□ -2.1
AP3B1O00203 AC105185.1-201ENST00000518705 535 ntBASIC1.95□□□□□ -2.1
AP3B1O00203 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.95□□□□□ -2.1
AP3B1O00203 AC090897.2-201ENST00000581715 130 ntBASIC1.95□□□□□ -2.1
AP3B1O00203 AC098614.4-201ENST00000607601 462 ntBASIC1.95□□□□□ -2.1
AP3B1O00203 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.95□□□□□ -2.1
AP3B1O00203 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
AP3B1O00203 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
AP3B1O00203 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
AP3B1O00203 RNU6-906P-201ENST00000384700 70 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 POLHP1-201ENST00000411806 470 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 AC084290.1-201ENST00000434995 374 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.94□□□□□ -2.1
AP3B1O00203 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.94□□□□□ -2.1
AP3B1O00203 AC104058.1-201ENST00000448028 297 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.94□□□□□ -2.1
AP3B1O00203 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.94□□□□□ -2.1
AP3B1O00203 AP000763.2-201ENST00000540641 163 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.94□□□□□ -2.1
AP3B1O00203 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.94□□□□□ -2.1
AP3B1O00203 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.94□□□□□ -2.1
AP3B1O00203 MIR3146-201ENST00000580367 79 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.94□□□□□ -2.1
AP3B1O00203 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.94□□□□□ -2.1
AP3B1O00203 uc_338.15-201ENST00000615470 191 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
AP3B1O00203 RBBP8P1-201ENST00000449447 1844 ntBASIC1.94□□□□□ -2.1
AP3B1O00203 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.93□□□□□ -2.1
AP3B1O00203 ZNF29P-201ENST00000225587 168 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 SNORA4.3-201ENST00000365564 137 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 SMIM11P1-201ENST00000369586 178 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.93□□□□□ -2.1
AP3B1O00203 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.93□□□□□ -2.1
AP3B1O00203 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AC008267.5-201ENST00000424928 265 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.93□□□□□ -2.1
AP3B1O00203 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.93□□□□□ -2.1
AP3B1O00203 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.93□□□□□ -2.1
AP3B1O00203 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.93□□□□□ -2.1
AP3B1O00203 HMGB3P12-201ENST00000438745 556 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.93□□□□□ -2.1
AP3B1O00203 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.93□□□□□ -2.1
AP3B1O00203 MTAPP1-201ENST00000489154 819 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.93□□□□□ -2.1
AP3B1O00203 AC008549.1-201ENST00000512900 643 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.93□□□□□ -2.1
AP3B1O00203 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.93□□□□□ -2.1
AP3B1O00203 RNU6-1092P-201ENST00000516955 87 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 MTATP6P15-201ENST00000527233 835 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AC023050.2-201ENST00000544968 387 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AC093249.1-201ENST00000567049 203 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.93□□□□□ -2.1
AP3B1O00203 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
AP3B1O00203 AL670379.2-201ENST00000604983 252 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 AL670379.4-201ENST00000605279 254 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 uc_338.12-201ENST00000616344 181 ntBASIC1.93□□□□□ -2.1
AP3B1O00203 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.93□□□□□ -2.1
AP3B1O00203 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
AP3B1O00203 RNU6-529P-201ENST00000363383 104 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 RNU6-931P-201ENST00000363850 107 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 RNU6-487P-201ENST00000365430 104 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 RNU6-157P-201ENST00000383957 107 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 RNU6-190P-201ENST00000384154 102 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 Y_RNA.500-201ENST00000384466 111 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 MIR186-201ENST00000384988 86 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 AL022400.1-201ENST00000423946 935 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 AL035407.1-201ENST00000429211 571 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.92□□□□□ -2.1
AP3B1O00203 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.92□□□□□ -2.1
AP3B1O00203 AC104685.1-201ENST00000502445 371 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 UBE2V1P12-201ENST00000503954 474 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
AP3B1O00203 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.92□□□□□ -2.1
AP3B1O00203 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.92□□□□□ -2.1
AP3B1O00203 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
AP3B1O00203 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.92□□□□□ -2.1
AP3B1O00203 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.92□□□□□ -2.1
AP3B1O00203 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.92□□□□□ -2.1
AP3B1O00203 BNIP3P30-201ENST00000601184 574 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 AC099842.1-201ENST00000619919 596 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 U1.36-201ENST00000620684 176 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 YWHAEP7-203ENST00000622054 312 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 AC010608.3-201ENST00000625048 527 ntBASIC1.92□□□□□ -2.1
AP3B1O00203 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
AP3B1O00203 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.92□□□□□ -2.1
AP3B1O00203 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
AP3B1O00203 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms