Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PRPS1P1-201ENST00000445305 876 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 DYNLL1P5-201ENST00000467158 270 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AC083904.1-201ENST00000487828 231 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 TRBV12-2-201ENST00000489763 344 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 RNU6-264P-201ENST00000517134 104 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 SNRPGP18-201ENST00000553000 214 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 MIR3149-201ENST00000584629 83 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 APOOP1-201ENST00000604695 592 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AC244205.2-202ENST00000635781 342 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 AC091152.2-201ENST00000591628 2569 ntBASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC187A0A096LP49 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 NCAPGP1-201ENST00000505112 1814 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.33-201ENST00000362591 102 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 RNU6-395P-201ENST00000365662 106 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 RNU6-505P-201ENST00000384427 107 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 MIR128-1-201ENST00000384921 82 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 MT-TG-201ENST00000387429 68 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 SNORD17-201ENST00000390930 237 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 RNU6-308P-201ENST00000390957 107 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 EIF4E2P1-201ENST00000393781 255 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 MIR548K-201ENST00000408406 116 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 RPL21P90-201ENST00000415692 466 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC114482.1-201ENST00000418010 247 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC092047.1-201ENST00000424997 240 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AL512844.2-201ENST00000433990 593 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC092573.2-201ENST00000434546 243 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AL731563.1-201ENST00000442202 214 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AL590664.1-201ENST00000448065 339 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC009901.1-201ENST00000506703 541 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 MTCO2P24-201ENST00000515611 426 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 RNU6-864P-201ENST00000516256 108 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 RNU6-1282P-201ENST00000516735 96 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AP003122.3-201ENST00000526316 255 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC084851.1-201ENST00000529105 249 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 APOOP3-201ENST00000536787 586 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC090115.3-201ENST00000553218 849 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AL157871.3-201ENST00000557231 293 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC110588.1-201ENST00000559699 137 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 MIR5047-201ENST00000579212 100 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AL355598.1-201ENST00000604169 202 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC136601.2-201ENST00000604356 474 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 YPEL5P2-201ENST00000605553 359 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 Z82243.1-201ENST00000609432 473 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 U4.6-201ENST00000621618 127 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC091925.1-201ENST00000623204 462 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AC244517.12-201ENST00000623581 663 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 SCARNA15.3-201ENST00000626315 122 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 SCARNA4.1-201ENST00000628597 123 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 CEP170P1-201ENST00000502249 4587 ntBASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC187A0A096LP49 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.112-201ENST00000363250 102 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 Y_RNA.414-201ENST00000384011 101 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 MIR578-201ENST00000384828 96 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 MIR325-201ENST00000385260 98 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 MIR591-201ENST00000385290 95 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 MTHFD2P2-201ENST00000407725 247 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 RPLP0P7-201ENST00000416050 667 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 CECR9-201ENST00000453421 199 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 RPL30P14-201ENST00000482744 348 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 RN7SL283P-201ENST00000489055 303 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 BTF3L4P4-201ENST00000506381 449 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC079140.5-201ENST00000507882 310 ntBASIC3.37□□□□□ -1.87
CCDC187A0A096LP49 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms