Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
CAPN6Q9Y6Q1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CAPN6Q9Y6Q1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CAPN6Q9Y6Q1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
CAPN6Q9Y6Q1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 DEFB108F-201ENST00000344638 222 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 RNU6-774P-201ENST00000363238 107 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.269-201ENST00000364685 89 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.405-201ENST00000383979 100 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.451-201ENST00000384200 100 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 RNY3P4-201ENST00000384428 101 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.524-201ENST00000384564 100 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.561-201ENST00000384694 100 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 MIR10A-201ENST00000385043 110 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 HMGN2P8-201ENST00000391458 268 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 RPS29P13-201ENST00000402041 169 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AL139156.1-201ENST00000412785 841 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AL590139.1-201ENST00000416267 400 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 BX679664.1-201ENST00000434429 253 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 RPL23AP22-201ENST00000437556 453 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AL500522.2-201ENST00000448562 343 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 MLLT10P2-201ENST00000506434 249 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AL359273.1-201ENST00000510918 627 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AC104581.2-201ENST00000572227 430 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AC025627.2-201ENST00000576220 160 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AL591424.2-201ENST00000617023 128 ntBASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CAPN6Q9Y6Q1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AC116096.1-201ENST00000566804 2314 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.16-201ENST00000362421 102 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 RPS16P5-201ENST00000406501 404 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 MIR1251-201ENST00000408552 70 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 TMEM167AP1-201ENST00000423409 219 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 RN7SL93P-201ENST00000463035 293 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 RPS20P22-201ENST00000473700 357 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 RN7SL271P-201ENST00000487601 295 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.706-201ENST00000516933 99 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 MIR2355-201ENST00000517199 87 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AP002770.2-201ENST00000543613 532 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AL645944.1-201ENST00000603857 493 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.772-201ENST00000606692 102 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 AL139811.1-201ENST00000424779 2299 ntBASIC4.23□□□□□ -1.73
CAPN6Q9Y6Q1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.143-201ENST00000363520 106 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 RNA5SP447-201ENST00000363749 119 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.245-201ENST00000364493 95 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.581-201ENST00000391017 97 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 MIR1298-201ENST00000408783 112 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 Y_RNA.793-201ENST00000411222 111 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 ELOCP19-201ENST00000411919 318 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AC083863.1-201ENST00000438811 231 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 PIGFP3-201ENST00000441918 722 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AC013470.1-201ENST00000453438 462 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AL136097.1-201ENST00000456945 913 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AC034236.1-201ENST00000469891 373 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AL160314.1-201ENST00000490836 438 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 SCARNA15.2-201ENST00000516409 127 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 CASP1P1-201ENST00000526345 212 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 ATP5F1P5-201ENST00000526403 760 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 RPL23AP78-201ENST00000599928 470 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms