Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HS3ST3A1Q9Y663 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HS3ST3A1Q9Y663 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HS3ST3A1Q9Y663 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.73□□□□□ -1.81
HS3ST3A1Q9Y663 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AP000560.1-201ENST00000624150 1937 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AL391987.6-201ENST00000305671 199 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 XIAPP3-201ENST00000312918 795 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 RNY1P16-201ENST00000363063 111 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 Y_RNA.277-201ENST00000364754 102 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 Y_RNA.471-201ENST00000384312 102 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 RPS4XP7-201ENST00000406274 780 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 MIR1250-201ENST00000408098 113 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 HSPD1P21-201ENST00000436541 245 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 SNORA71B-202ENST00000439232 272 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AC127537.2-201ENST00000439258 465 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 RPS3AP46-201ENST00000448352 682 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 RNU7-169P-201ENST00000459456 61 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AC010469.1-201ENST00000463864 576 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 RPL23AP55-201ENST00000498163 452 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AC074198.2-201ENST00000508153 258 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AC021753.1-201ENST00000635724 168 ntBASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HS3ST3A1Q9Y663 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 Y_RNA.81-201ENST00000362997 102 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RNU6-704P-201ENST00000364162 103 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RNU6-1078P-201ENST00000364522 103 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RNA5SP51-201ENST00000364750 119 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RNU6-1303P-201ENST00000364841 107 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RNU6-356P-201ENST00000384140 107 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 Y_RNA.526-201ENST00000384572 110 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 MIR1298-201ENST00000408783 112 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RNU2-15P-201ENST00000410692 191 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC093578.1-201ENST00000415219 368 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RPS12P23-201ENST00000419579 400 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RPL29P29-201ENST00000448725 423 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 SNORD105B-201ENST00000458770 79 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RPL7P49-201ENST00000471402 708 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RN7SL432P-201ENST00000484057 298 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC110768.1-201ENST00000509222 400 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 NDUFB4P9-201ENST00000511646 388 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC026726.1-201ENST00000512859 601 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 SNORA31.6-201ENST00000516241 130 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 IGKV2D-19-201ENST00000523346 262 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC069240.1-201ENST00000548774 375 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC004024.1-201ENST00000549244 247 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AL390123.1-201ENST00000603216 237 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC025946.2-201ENST00000603398 234 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AL355877.2-201ENST00000603670 358 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 MZT1P2-201ENST00000604387 248 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC002044.1-201ENST00000606707 158 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC069200.1-201ENST00000609511 323 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AC015813.4-201ENST00000610469 179 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 AL137003.2-201ENST00000606924 2538 ntBASIC3.71□□□□□ -1.82
HS3ST3A1Q9Y663 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 RNA5SP52-201ENST00000362448 134 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 SNORA63.1-201ENST00000362493 131 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 RNU6-371P-201ENST00000364283 108 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 SNORD50.2-201ENST00000365465 70 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 RNY1P5-201ENST00000383890 115 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 RNU6-1027P-201ENST00000383998 107 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 RNU6-48P-201ENST00000384161 107 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 SNORD115-46-201ENST00000390982 71 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 RNA5SP424-201ENST00000390988 115 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 AL139039.1-201ENST00000401900 692 ntBASIC3.7□□□□□ -1.82
HS3ST3A1Q9Y663 ATP5A1P2-201ENST00000412323 255 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms