Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HCFC2Q9Y5Z7 MTND5P6-201ENST00000422338 1798 ntBASIC4.06□□□□□ -1.76
HCFC2Q9Y5Z7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HCFC2Q9Y5Z7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HCFC2Q9Y5Z7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.06□□□□□ -1.76
HCFC2Q9Y5Z7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 RPL9P7-201ENST00000330965 580 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 RNU6-212P-201ENST00000362642 104 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 RNU1-76P-201ENST00000362903 159 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 Y_RNA.533-201ENST00000384596 114 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 RNU6-33P-201ENST00000384793 107 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 SNORA69.1-201ENST00000390904 137 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 SNORD58.1-201ENST00000391313 66 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 SNORA3C-201ENST00000408792 125 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 AC004383.1-201ENST00000438135 289 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 AL513043.1-201ENST00000439124 535 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 RPL9P9-202ENST00000466501 579 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 HMGN2P13-201ENST00000476476 274 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 SNORA31.6-201ENST00000516241 130 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 RNU6-182P-201ENST00000516970 105 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 AC084851.1-201ENST00000529105 249 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 AC022080.3-201ENST00000544433 482 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 AC011471.1-201ENST00000585766 187 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 MIR8076-201ENST00000611401 83 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 MIR1244-1-201ENST00000612829 85 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 MIR1244-3-201ENST00000635744 85 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 MIR1244-2-201ENST00000636449 85 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 MIR1244-4-202ENST00000636813 85 ntBASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCFC2Q9Y5Z7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MTND5P9-201ENST00000503854 1755 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MIR412-201ENST00000362142 91 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 Y_RNA.416-201ENST00000384014 113 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 Y_RNA.471-201ENST00000384312 102 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MIR218-2-201ENST00000385006 110 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MIR628-201ENST00000385229 95 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MIR199A2-201ENST00000385289 110 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MIR708-201ENST00000390708 88 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MTCYBP2-201ENST00000407745 171 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 Y_RNA.592-201ENST00000410274 109 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MTCO1P39-201ENST00000426148 480 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 OR2AQ1P-201ENST00000451972 200 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 U8.21-201ENST00000459536 136 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 RNU6-138P-201ENST00000515952 107 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 RRN3P3-201ENST00000549207 578 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MIR4513-201ENST00000581077 86 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 AC012433.1-201ENST00000588916 398 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 AL355877.2-201ENST00000603670 358 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 AC098826.3-201ENST00000603823 466 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 RNA5SP108-201ENST00000605921 117 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 MFSD8-236ENST00000641509 4050 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 AC027290.2-201ENST00000623210 18662 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 Z73965.1-201ENST00000623412 2297 ntBASIC4.04□□□□□ -1.76
HCFC2Q9Y5Z7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AL356489.2-201ENST00000566968 3528 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RNU6-1167P-201ENST00000363227 94 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RNU6-1317P-201ENST00000364582 104 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 MYL8P-204ENST00000431574 518 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RPEP5-201ENST00000441137 268 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms