Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB11Q9Y5F2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDHB11Q9Y5F2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AC079741.1-201ENST00000321498 212 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 RNU4-80P-201ENST00000363200 141 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 RNU5F-3P-201ENST00000363767 117 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 SNORA72.2-201ENST00000365028 127 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 Y_RNA.400-201ENST00000383963 111 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 SNORA36A-201ENST00000384221 132 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 Y_RNA.568-201ENST00000384742 113 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 MIR544A-201ENST00000384855 91 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 RNU6-1197P-201ENST00000391183 107 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AC138623.1-201ENST00000418060 216 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 HMGN2P30-201ENST00000423237 256 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AL162725.1-201ENST00000435405 301 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 RPL30P5-201ENST00000494923 336 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 HMGB3P3-201ENST00000510526 400 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 CYCSP23-201ENST00000519781 313 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 AC091895.1-201ENST00000624494 256 ntBASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHB11Q9Y5F2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 Y_RNA.488-201ENST00000384403 102 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 SNORA40.19-201ENST00000390846 128 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 AC112220.1-201ENST00000434628 355 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 AC125238.1-201ENST00000448842 249 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RPS17P2-201ENST00000461663 408 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RN7SKP122-201ENST00000515923 296 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RNU6-966P-201ENST00000516479 104 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RNU6-1282P-201ENST00000516735 96 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RNU6-1073P-201ENST00000517182 106 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 TOMM20P2-201ENST00000540082 421 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 MIR3936-201ENST00000584304 110 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 AL391358.1-201ENST00000605342 190 ntBASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHB11Q9Y5F2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
PCDHB11Q9Y5F2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 AC092268.1-201ENST00000342691 405 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 RNA5SP113-201ENST00000410486 84 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 RPS26P42-201ENST00000413485 326 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 AC078809.1-201ENST00000427601 140 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 HMGN2P21-201ENST00000447764 270 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 snoU13.1-201ENST00000459157 104 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 AC022795.1-201ENST00000473808 480 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 AC021231.3-201ENST00000558497 370 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 AC012468.1-201ENST00000604888 430 ntBASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB11Q9Y5F2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 Y_RNA.7-201ENST00000362352 102 ntBASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 RNU1-108P-201ENST00000362556 161 ntBASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 SNORA7.2-201ENST00000364446 145 ntBASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 RNU6-312P-201ENST00000364629 107 ntBASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 RNA5SP505-201ENST00000364748 108 ntBASIC4.76□□□□□ -1.65
PCDHB11Q9Y5F2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms