Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AL049745.1-201ENST00000433953 286 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC073850.1-201ENST00000449243 255 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AL389915.2-201ENST00000454576 441 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AL591473.1-201ENST00000464297 313 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-703P-201ENST00000516946 107 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 IPO5P1-202ENST00000600039 287 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC136601.2-201ENST00000604356 474 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AL359198.2-201ENST00000611836 194 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AC092268.1-201ENST00000342691 405 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-799P-201ENST00000363567 107 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-1082P-201ENST00000364574 107 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 Y_RNA.280-201ENST00000364765 112 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 Y_RNA.584-201ENST00000391090 114 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AL592291.1-201ENST00000403830 352 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 CYCSP49-201ENST00000420810 319 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AC012306.1-201ENST00000423267 114 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AC006466.1-201ENST00000438721 289 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 RPL39P29-201ENST00000447779 157 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AL031737.1-201ENST00000450125 223 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AC007215.1-201ENST00000464893 276 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 MIR5688-201ENST00000580619 83 ntBASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB3Q9Y5E6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AL136164.4-201ENST00000625013 2135 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 MIR548A3-201ENST00000385297 97 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AL591034.1-201ENST00000407447 340 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 YPEL5P1-201ENST00000419731 367 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AC078809.1-201ENST00000427601 140 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 IFNWP4-201ENST00000453148 294 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AC006349.1-201ENST00000555526 235 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AC133485.4-201ENST00000561835 220 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 RPL10P14-201ENST00000565265 298 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AC138907.4-201ENST00000570107 226 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AC006116.3-201ENST00000592968 361 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AP000769.2-201ENST00000602344 396 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 AC105254.2-201ENST00000603636 436 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB3Q9Y5E6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-356P-201ENST00000384140 107 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 RPL21P17-201ENST00000397467 475 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 AL590762.4-201ENST00000425885 253 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 AL158147.1-201ENST00000443970 75 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 RPS4XP13-201ENST00000483219 789 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 AC090142.3-201ENST00000519012 385 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 AP004607.2-201ENST00000533949 322 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 MED28P6-201ENST00000558776 231 ntBASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 RN7SL356P-201ENST00000582228 248 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms