Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PISRT1.1-201ENST00000616930 107 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AC098657.3-201ENST00000620434 263 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AC091925.1-201ENST00000623204 462 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AL049641.1-201ENST00000441055 1948 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 ZNF807-201ENST00000328088 1707 ntBASIC4.07□□□□□ -1.76
CTDP1Q9Y5B0 AL021368.2-201ENST00000606125 5352 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 HSPA8P4-201ENST00000511877 1920 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-288P-201ENST00000363690 104 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RNU1-33P-201ENST00000364249 162 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-128P-201ENST00000383976 107 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RPS4XP7-201ENST00000406274 780 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 Y_RNA.646-201ENST00000410980 101 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RN7SKP53-201ENST00000411337 315 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 ATG3P1-201ENST00000419507 911 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AL669831.1-202ENST00000428504 417 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RBMY2UP-201ENST00000453474 324 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 BX510359.1-201ENST00000456973 237 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RPS23P3-201ENST00000470993 430 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-976P-201ENST00000516086 111 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RNU2-27P-201ENST00000516185 142 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 SNORA31.8-201ENST00000516327 108 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1016P-201ENST00000516689 94 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 Y_RNA.720-201ENST00000517166 92 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AC008489.1-201ENST00000524271 483 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 MTCO3P23-201ENST00000561363 289 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AC100830.2-201ENST00000581636 240 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AL049781.1-201ENST00000623195 3585 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 KPNA2P1-201ENST00000458289 1591 ntBASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTDP1Q9Y5B0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 SNORA38.1-201ENST00000364172 131 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC117470.1-201ENST00000381974 330 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 SNORA9-201ENST00000384215 133 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-882P-201ENST00000391025 103 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AL356057.3-201ENST00000402607 340 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC117503.1-201ENST00000472241 394 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 PTP4A1P4-201ENST00000512479 322 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 SNORA74D-201ENST00000516404 141 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 SNORD59.2-201ENST00000516873 68 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 RN7SKP295-201ENST00000517264 153 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AL355836.1-201ENST00000555951 870 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 AC244205.2-202ENST00000635781 342 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 MTND4P1-201ENST00000457501 1466 ntBASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTDP1Q9Y5B0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1040P-201ENST00000383974 107 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 SNORA75B-201ENST00000384053 137 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-463P-201ENST00000384340 107 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-14P-201ENST00000384630 106 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1106P-201ENST00000390845 107 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 SNORD17-201ENST00000390930 237 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-817P-201ENST00000391083 104 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1077P-201ENST00000410506 102 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC080125.1-201ENST00000414888 684 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AL160275.3-201ENST00000423876 471 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AL591212.2-201ENST00000433923 257 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 HIGD1AP11-201ENST00000438361 280 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 HMGN2P13-201ENST00000476476 274 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms