Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNU6-890P-201ENST00000384121 107 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-842P-201ENST00000384269 107 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 MIR559-201ENST00000385188 96 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 AC099548.1-201ENST00000421443 426 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 HMGN2P30-201ENST00000423237 256 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 TOMM20P4-201ENST00000427861 435 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 SNORA71B-202ENST00000439232 272 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 HMGB1P37-201ENST00000439613 609 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 MTATP6P7-201ENST00000453315 681 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 MIR2053-201ENST00000459295 91 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 Y_RNA.631-201ENST00000459607 101 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 AC090877.1-201ENST00000561418 344 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 MTND5P10-201ENST00000603719 1809 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 ZNF826P-207ENST00000622273 1910 ntBASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 Y_RNA.31-201ENST00000362574 102 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-283P-201ENST00000364788 107 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 Y_RNA.445-201ENST00000384168 102 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-72P-201ENST00000384285 79 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-331P-201ENST00000384724 107 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 MIR518D-201ENST00000385014 87 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 snosnR66.1-201ENST00000391095 99 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 MIR888-201ENST00000401186 77 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AL117339.3-201ENST00000418733 162 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AC006946.1-201ENST00000429106 328 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AC098831.1-201ENST00000440661 216 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 PCMTD1P1-201ENST00000455560 355 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AC084357.1-201ENST00000473404 255 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 UBE2CP3-201ENST00000502715 450 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AC110768.1-201ENST00000509222 400 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 PTP4A1P4-201ENST00000512479 322 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 RNA5SP384-201ENST00000516615 116 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AC011602.1-201ENST00000546484 331 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AL355598.1-201ENST00000604169 202 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 MTND4LP5-201ENST00000605152 292 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 uc_338.22-201ENST00000622722 187 ntBASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.26□□□□□ -1.73
R3HCC1Q9Y3T6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-428P-201ENST00000362942 107 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 RNA5SP399-201ENST00000364003 117 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-898P-201ENST00000365627 104 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 U1.1-201ENST00000384101 164 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-308P-201ENST00000390957 107 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 RN7SKP53-201ENST00000411337 315 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 RPL26P27-201ENST00000414397 437 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 AL158071.1-201ENST00000430315 461 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 AC103996.1-201ENST00000555468 102 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 BNIP3P22-201ENST00000593399 556 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 CYP2C61P-201ENST00000604072 290 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 AP000787.2-201ENST00000604432 568 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 FAM35BP-202ENST00000497389 3337 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 MTND4P27-201ENST00000450813 1354 ntBASIC4.25□□□□□ -1.73
R3HCC1Q9Y3T6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 SRP72P2-201ENST00000344851 1979 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-1317P-201ENST00000364582 104 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 RNA5SP479-201ENST00000364858 117 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 RNU1-64P-201ENST00000365443 163 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 SNORA1.3-201ENST00000384676 136 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 AL133396.1-201ENST00000432048 687 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-1037P-201ENST00000459571 107 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 AL049830.2-201ENST00000480072 201 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 RPS27AP10-201ENST00000496103 208 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.24□□□□□ -1.73
R3HCC1Q9Y3T6 CPDP1-201ENST00000579660 283 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms