Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 RPL23AP93-201ENST00000440847 484 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 PHBP16-201ENST00000446318 950 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 SNORA84-201ENST00000459229 133 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 AC034236.1-201ENST00000469891 373 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 PARP4P3-201ENST00000510265 317 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 AC022616.8-201ENST00000533569 253 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 AC233702.9-201ENST00000581528 203 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 AC091178.1-203ENST00000584586 279 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 RNA5SP317-201ENST00000410176 116 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 RNA5SP311-201ENST00000411290 116 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 AC009237.10-201ENST00000414112 510 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 NDUFB4P7-201ENST00000423198 363 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 AC073901.1-201ENST00000462471 408 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 AC053481.1-201ENST00000467217 306 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 AC005912.1-201ENST00000495392 255 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 RNA5SP315-201ENST00000516340 116 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 Y_RNA.706-201ENST00000516933 99 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 RNA5SP312-201ENST00000517068 116 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-537P-201ENST00000517277 103 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 RPL23AP78-201ENST00000599928 470 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 snoU18.1-201ENST00000629629 71 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 BMS1P21-201ENST00000634565 365 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 MIR1245B-201ENST00000636115 69 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 AC092435.4-201ENST00000623012 4159 ntBASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDZRN3Q9UPQ7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-263P-201ENST00000363811 107 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 RPS23P10-201ENST00000416185 486 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 AIMP1P2-201ENST00000425294 312 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 RPL23AP33-201ENST00000442301 452 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 AC010683.1-201ENST00000473673 378 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 Y_RNA.685-201ENST00000516532 108 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 MIR4431-201ENST00000579990 94 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 LRRC37A5P-203ENST00000580181 585 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 BPIFA4P-203ENST00000603168 689 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 AL645944.1-201ENST00000603857 493 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 AC123912.5-201ENST00000605470 343 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 AC068647.2-201ENST00000637380 353 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 ZNF720P1-201ENST00000562403 1939 ntBASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDZRN3Q9UPQ7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AL596211.1-201ENST00000569873 2277 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AL359837.1-201ENST00000381357 287 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 MIR659-201ENST00000384963 97 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-754P-201ENST00000391166 107 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AL160275.2-201ENST00000412010 394 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AC006130.2-201ENST00000586202 326 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AL591034.3-201ENST00000605511 685 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 AC110801.1-201ENST00000623590 212 ntBASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.68□□□□□ -1.5
PDZRN3Q9UPQ7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 AC139713.2-215ENST00000641428 5037 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms