Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SETP5-201ENST00000437270 562 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 AP000893.1-201ENST00000474462 794 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 SNORA14.1-201ENST00000516113 141 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RNU1-54P-201ENST00000517181 120 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC026371.1-201ENST00000551867 419 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 SULT1C2P2-201ENST00000562517 294 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC130289.1-201ENST00000577321 73 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC138761.3-201ENST00000579993 334 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC009570.1-201ENST00000609599 745 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.57□□□□□ -2
NOTCH3Q9UM47 U6.104-201ENST00000637979 90 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NOTCH3Q9UM47 AC008669.1-201ENST00000565823 2178 ntBASIC2.57□□□□□ -2
NOTCH3Q9UM47 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC007496.3-201ENST00000624987 3443 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 Y_RNA.471-201ENST00000384312 102 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNU6-328P-201ENST00000390887 106 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 MRPS18CP6-201ENST00000423587 223 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC096632.1-201ENST00000427395 310 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL031274.1-201ENST00000450334 232 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RPS15AP1-201ENST00000457423 391 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RPL9P32-201ENST00000464118 620 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNU6-1278P-201ENST00000516130 107 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNU6-1212P-201ENST00000517023 104 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNU6-111P-201ENST00000517179 105 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC087441.2-201ENST00000529141 262 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AP003733.2-201ENST00000529409 171 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC022080.3-201ENST00000544433 482 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL121603.1-201ENST00000553815 142 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL670379.6-201ENST00000603753 252 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC008162.1-201ENST00000604718 254 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL670379.1-201ENST00000604752 252 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL670379.5-201ENST00000605253 252 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL670379.8-201ENST00000605353 252 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL670379.7-201ENST00000605823 252 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 MIR4272-201ENST00000635924 64 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL138713.1-201ENST00000624026 2130 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 Y_RNA.29-201ENST00000362570 113 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 Y_RNA.64-201ENST00000362845 102 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNU6-338P-201ENST00000383888 105 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 MIR215-201ENST00000384858 110 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 PCNPP3-201ENST00000393579 471 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AL136131.1-201ENST00000406079 803 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 MIR1261-201ENST00000408659 82 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNU4-46P-201ENST00000410818 138 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 DPPA2P2-201ENST00000418220 897 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 TMSB4XP3-201ENST00000445144 114 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.56□□□□□ -2
NOTCH3Q9UM47 RPS4XP2-201ENST00000458402 793 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC116562.3-201ENST00000506136 177 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RPS27AP18-201ENST00000515536 459 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 RNU5B-3P-201ENST00000516601 115 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC018442.3-201ENST00000523025 183 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AP006587.4-201ENST00000526053 529 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC068587.5-201ENST00000528506 175 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC090115.3-201ENST00000553218 849 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC091544.4-201ENST00000555268 342 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 AC025034.2-201ENST00000623264 286 ntBASIC2.56□□□□□ -2
NOTCH3Q9UM47 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NOTCH3Q9UM47 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 TPTE2P4-201ENST00000258589 1605 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC103710.2-202ENST00000641454 2853 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 AL049781.1-201ENST00000623195 3585 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 SNORA5B-201ENST00000363786 132 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 RNU6-128P-201ENST00000383976 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms