Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC079140.2-201ENST00000506193 142 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.47□□□□□ -2.33
SCN11AQ9UI33 MIR4504-201ENST00000577413 92 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 HMGN2P15-201ENST00000585707 270 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AP000254.1-201ENST00000609934 520 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AC006213.5-201ENST00000619673 288 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SCN11AQ9UI33 RNU6-968P-201ENST00000384076 107 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 MIR608-201ENST00000384820 100 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 MIR218-1-201ENST00000384999 110 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 RPS27P16-201ENST00000425758 201 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 YWHAZP8-201ENST00000436935 731 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AL133373.1-201ENST00000497098 94 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AC091435.1-201ENST00000505442 584 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AC008562.1-201ENST00000521763 330 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 AL365204.3-201ENST00000612448 685 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 U1.36-201ENST00000620684 176 ntBASIC0.47□□□□□ -2.33
SCN11AQ9UI33 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
SCN11AQ9UI33 U3.8-201ENST00000363675 217 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 SNORA2A-201ENST00000383885 135 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 SNORA29-201ENST00000384183 140 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 MIR1265-201ENST00000408444 86 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 MTND2P19-201ENST00000449129 1012 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 RNU6-798P-201ENST00000516912 103 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 DEFB108D-201ENST00000527787 222 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AC146944.4-201ENST00000602697 718 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AP000654.2-201ENST00000605633 586 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AC087588.2-201ENST00000617667 426 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AC073308.1-201ENST00000623696 305 ntBASIC0.46□□□□□ -2.34
SCN11AQ9UI33 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
SCN11AQ9UI33 RNU1-23P-201ENST00000363361 144 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 MIR10B-201ENST00000385011 110 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 HSPE1P13-201ENST00000451143 297 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 RAP1BP2-201ENST00000478270 544 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AC121161.1-201ENST00000510606 652 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AC104057.1-201ENST00000515547 497 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 SCARNA1-201ENST00000517138 166 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AC005832.3-201ENST00000537929 631 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 LINC00557-201ENST00000563184 1279 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 MTND4LP5-201ENST00000605152 292 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AC013470.4-201ENST00000619978 986 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 ZNF680P1-201ENST00000436625 1469 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AL391516.1-201ENST00000554380 2449 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 RNU6-271P-201ENST00000363858 105 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 RNA5SP331-201ENST00000364986 107 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 RNU6-821P-201ENST00000390995 107 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AC069282.1-201ENST00000411911 526 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 MTND5P8-201ENST00000449817 1083 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 RPS20P24-201ENST00000457473 361 ntBASIC0.45□□□□□ -2.34
SCN11AQ9UI33 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.45□□□□□ -2.34
SCN11AQ9UI33 MTND5P30-201ENST00000452896 1731 ntBASIC0.44□□□□□ -2.34
SCN11AQ9UI33 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SCN11AQ9UI33 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SCN11AQ9UI33 Y_RNA.303-201ENST00000364998 94 ntBASIC0.44□□□□□ -2.34
SCN11AQ9UI33 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
SCN11AQ9UI33 AL022718.1-201ENST00000412004 84 ntBASIC0.44□□□□□ -2.34
SCN11AQ9UI33 RPL21P24-201ENST00000413752 448 ntBASIC0.44□□□□□ -2.34
SCN11AQ9UI33 AL160275.3-201ENST00000423876 471 ntBASIC0.44□□□□□ -2.34
SCN11AQ9UI33 MTND4LP10-201ENST00000435146 291 ntBASIC0.44□□□□□ -2.34
SCN11AQ9UI33 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN11AQ9UI33 RNU6-1004P-201ENST00000516584 111 ntBASIC0.44□□□□□ -2.34
SCN11AQ9UI33 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SCN11AQ9UI33 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN11AQ9UI33 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.44□□□□□ -2.34
SCN11AQ9UI33 MTCO1P23-201ENST00000415223 1526 ntBASIC0.43□□□□□ -2.34
SCN11AQ9UI33 RNU6-374P-201ENST00000364146 108 ntBASIC0.43□□□□□ -2.34
SCN11AQ9UI33 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN11AQ9UI33 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN11AQ9UI33 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.43□□□□□ -2.34
SCN11AQ9UI33 AC111000.5-201ENST00000506559 1178 ntBASIC0.43□□□□□ -2.34
SCN11AQ9UI33 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN11AQ9UI33 RNU6-1308P-201ENST00000516817 103 ntBASIC0.43□□□□□ -2.34
SCN11AQ9UI33 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.43□□□□□ -2.34
SCN11AQ9UI33 CENPUP1-201ENST00000526649 1202 ntBASIC0.43□□□□□ -2.34
SCN11AQ9UI33 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.43□□□□□ -2.34
SCN11AQ9UI33 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.43□□□□□ -2.34
SCN11AQ9UI33 Y_RNA.167-201ENST00000363735 109 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 MIR325-201ENST00000385260 98 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 PRRC2CP1-201ENST00000404428 159 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms