Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 FABP5P15-201ENST00000453566 214 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AL139824.2-201ENST00000458731 1095 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 RPL39P36-201ENST00000490784 156 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 FAM92A1P2-202ENST00000504766 877 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AC107393.1-201ENST00000512403 346 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 RNU1-40P-201ENST00000516816 164 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 RNU1-97P-201ENST00000516872 164 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AC145350.1-201ENST00000567426 208 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 MIR4498-201ENST00000577599 66 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 MIR3118-1-201ENST00000581787 76 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 BNIP3P9-201ENST00000603714 553 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AC091953.2-201ENST00000623979 160 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.59□□□□□ -2
NPC1L1Q9UHC9 AC135776.4-201ENST00000624300 1904 ntBASIC2.59□□□□□ -2
NPC1L1Q9UHC9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 MTND4P4-201ENST00000439033 1366 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 HSPE1P11-201ENST00000339579 310 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 RNU6-512P-201ENST00000364438 103 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 RN7SKP226-201ENST00000364912 300 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 RNA5SP138-201ENST00000365098 114 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 MIR9-3-201ENST00000385084 90 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 RPL23AP36-201ENST00000413895 458 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 BPY2DP-201ENST00000422208 265 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 HMGN2P38-201ENST00000423806 265 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AL592045.1-201ENST00000429867 352 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 UBE2D3P4-201ENST00000441973 436 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 FABP5P13-201ENST00000452144 328 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 MTATP6P7-201ENST00000453315 681 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 ART2BP-201ENST00000453501 499 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 RNU7-51P-201ENST00000516560 62 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 RNU6-1092P-201ENST00000516955 87 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AC090616.3-201ENST00000582184 217 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 WISP1-OT1-201ENST00000602893 642 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AL022161.1-201ENST00000604390 213 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 Z99289.3-201ENST00000605586 594 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AL391813.2-201ENST00000609113 322 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AC011939.3-201ENST00000613686 466 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AC092140.2-201ENST00000618027 521 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 MIR3199-2-201ENST00000636243 86 ntBASIC2.58□□□□□ -2
NPC1L1Q9UHC9 AL139276.1-201ENST00000311910 1001 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 RNU6-960P-201ENST00000364056 120 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 RNU5E-6P-201ENST00000365574 115 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 Y_RNA.598-201ENST00000410480 95 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC105252.1-201ENST00000503089 286 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 NDUFB4P2-201ENST00000509515 391 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 RNU6-677P-201ENST00000516914 101 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC025755.1-201ENST00000521306 278 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 OR4R1P-201ENST00000529879 463 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AK6P1-201ENST00000540219 478 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC110588.1-201ENST00000559699 137 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 SNRPGP19-201ENST00000603826 189 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC112191.3-201ENST00000604371 277 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AP000860.1-201ENST00000605250 559 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AL365204.3-201ENST00000612448 685 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AC108479.2-201ENST00000617314 601 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 AL589994.2-201ENST00000621124 579 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 U2.21-201ENST00000637295 81 ntBASIC2.57□□□□□ -2
NPC1L1Q9UHC9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPC1L1Q9UHC9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms