Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 RNA5SP447-201ENST00000363749 119 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 Y_RNA.272-201ENST00000364696 102 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 Y_RNA.498-201ENST00000384460 102 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 MIR23A-201ENST00000385245 73 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AC084357.1-201ENST00000473404 255 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AC005921.1-201ENST00000510589 286 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 RNU5F-8P-201ENST00000515941 111 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AL133393.1-201ENST00000603277 287 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AL591034.3-201ENST00000605511 685 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 AL357075.2-201ENST00000614906 189 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 CR381572.2-201ENST00000624852 397 ntBASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LIMD1Q9UGP4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AL022322.2-201ENST00000624072 20397 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AC099654.7-201ENST00000635788 2127 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 SNORA73.1-201ENST00000363107 205 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RNU6-211P-201ENST00000384047 107 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 SNORA36A-201ENST00000384221 132 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AL160275.2-201ENST00000412010 394 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 COX5BP7-201ENST00000414780 274 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 HMGB1P37-201ENST00000439613 609 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RPL39P29-201ENST00000447779 157 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RPL26P9-201ENST00000457466 433 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 snoU13.6-201ENST00000458785 104 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RPL7AP28-201ENST00000464513 571 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AC007215.1-201ENST00000464893 276 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AC140059.1-201ENST00000489238 361 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RPS27AP10-201ENST00000496103 208 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RNA5SP464-201ENST00000516251 108 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RNU6-191P-201ENST00000516295 94 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RNU6-62P-201ENST00000516526 102 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 AC008079.2-201ENST00000623543 20396 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 RBBP8P1-201ENST00000449447 1844 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 ADAM3A-203ENST00000461344 2157 ntBASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMD1Q9UGP4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 RNU6-600P-201ENST00000362524 99 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 RNA5SP388-201ENST00000362584 119 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 RNU6-653P-201ENST00000363074 106 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 RNU6-793P-201ENST00000384233 104 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 Y_RNA.571-201ENST00000384753 98 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 RNU2-51P-201ENST00000410708 197 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 RN7SL817P-201ENST00000480777 288 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 MTND6P33-201ENST00000571794 183 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 USP8P1-201ENST00000494673 3183 ntBASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMD1Q9UGP4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 AC104260.2-201ENST00000623551 3497 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 RNU4-80P-201ENST00000363200 141 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 SNORD113.2-201ENST00000364166 89 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 RNU6-312P-201ENST00000364629 107 ntBASIC5.09□□□□□ -1.59
LIMD1Q9UGP4 MIR129-1-201ENST00000384972 72 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms