Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 RNU6-377P-201ENST00000515965 102 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 RNA5SP384-201ENST00000516615 116 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 TRMT10BP1-201ENST00000519377 943 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 LINC00933-203ENST00000559812 219 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 AC007224.1-201ENST00000564410 144 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 AMZ2P1-203ENST00000565833 850 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 AP000787.2-201ENST00000604432 568 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 AL354798.1-201ENST00000622505 329 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 SCARNA4-202ENST00000625402 129 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 CEP170P1-201ENST00000502249 4587 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RLIMQ9NVW2 SRP72P2-201ENST00000344851 1979 ntBASIC3.42□□□□□ -1.86
RLIMQ9NVW2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 Y_RNA.162-201ENST00000363683 102 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 RNU6-1040P-201ENST00000383974 107 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 RNU6-328P-201ENST00000390887 106 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 U3.37-201ENST00000408528 213 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 RNA5SP31-201ENST00000411144 127 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 USMG5P1-201ENST00000425964 177 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC092017.2-201ENST00000427600 362 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC004975.1-201ENST00000428733 208 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AL133396.1-201ENST00000432048 687 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 SNRPEP4-201ENST00000435815 279 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 NOTCH2P1-201ENST00000443481 624 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC103987.1-201ENST00000473394 348 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC090096.1-201ENST00000489168 390 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 RPS27AP10-201ENST00000496103 208 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 ACA59.1-201ENST00000515966 143 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 Y_RNA.661-201ENST00000516003 99 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 MIR2116-201ENST00000517221 80 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AP000867.2-201ENST00000532468 320 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 OR8R1P-201ENST00000543943 764 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 CYCSP30-201ENST00000546447 172 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC087499.8-201ENST00000578406 226 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 RN7SL703P-201ENST00000578485 302 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC078795.3-201ENST00000602913 472 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 CYP2C61P-201ENST00000604072 290 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AC004852.3-201ENST00000614131 326 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 AL732372.2-225ENST00000642124 456 ntBASIC3.41□□□□□ -1.86
RLIMQ9NVW2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RLIMQ9NVW2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RLIMQ9NVW2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.4□□□□□ -1.86
RLIMQ9NVW2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RLIMQ9NVW2 Y_RNA.31-201ENST00000362574 102 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 RNU6-78P-201ENST00000362897 107 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 RN7SKP227-201ENST00000364445 330 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 RNU6-842P-201ENST00000384269 107 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AP000567.1-201ENST00000406413 156 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 SNORA57.3-201ENST00000411095 141 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AL117339.3-201ENST00000418733 162 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AL139247.1-201ENST00000422768 325 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 RPL23AP82-202ENST00000427528 469 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 HIGD1AP2-201ENST00000446367 280 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 SSXP4-201ENST00000451349 245 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 NUTF2P7-201ENST00000453086 375 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 U8.21-201ENST00000459536 136 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 HMGN2P13-201ENST00000476476 274 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 PTP4A1P4-201ENST00000512479 322 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 RNU6-120P-201ENST00000516077 103 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AC109479.2-201ENST00000517842 174 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 SNRPGP18-201ENST00000553000 214 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AC136624.4-201ENST00000573044 370 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 SNRPGP17-201ENST00000603780 214 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AL591516.1-201ENST00000611326 274 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AC068831.7-201ENST00000616954 363 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RLIMQ9NVW2 AL731566.2-201ENST00000618971 317 ntBASIC3.4□□□□□ -1.87
RLIMQ9NVW2 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 442.3 ms