Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC012442.3-202ENST00000636742 206 ntBASIC3.68□□□□□ -1.82
CCM2LQ9NUG4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.68□□□□□ -1.82
CCM2LQ9NUG4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.68□□□□□ -1.82
CCM2LQ9NUG4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.68□□□□□ -1.82
CCM2LQ9NUG4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2LQ9NUG4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCM2LQ9NUG4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2LQ9NUG4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AP001148.1-201ENST00000624124 2359 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 RNU6-898P-201ENST00000365627 104 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 RNU6-306P-201ENST00000384617 107 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 Z99755.1-201ENST00000414048 380 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC093578.1-201ENST00000415219 368 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AL354751.2-201ENST00000415471 210 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC097713.2-201ENST00000430199 356 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 PCMTD1P1-201ENST00000455560 355 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 snoU13.28-201ENST00000459235 104 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 snoU109.2-201ENST00000459316 135 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 TRAV32-201ENST00000553993 340 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AL442663.2-201ENST00000554385 511 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC093249.1-201ENST00000567049 203 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC009314.1-201ENST00000603871 304 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 MTND4LP5-201ENST00000605152 292 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC080078.3-201ENST00000605407 463 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC019193.3-201ENST00000609144 554 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AL591516.1-201ENST00000611326 274 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 MIR6134-201ENST00000617606 109 ntBASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCM2LQ9NUG4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC110491.1-201ENST00000562191 2010 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC007256.1-201ENST00000392253 2765 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RNU6-78P-201ENST00000362897 107 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RNA5SP399-201ENST00000364003 117 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RNU6-827P-201ENST00000365553 106 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RNU6-43P-201ENST00000384302 107 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 MIR518D-201ENST00000385014 87 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 Y_RNA.579-201ENST00000390939 94 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 SNORA75.4-201ENST00000391278 119 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC098831.1-201ENST00000440661 216 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 SNORD5.1-201ENST00000458800 75 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 U8.21-201ENST00000459536 136 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC026782.1-201ENST00000512952 449 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RNU6-1153P-201ENST00000516760 105 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AP000654.2-201ENST00000605633 586 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC004852.3-201ENST00000614131 326 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC084757.4-201ENST00000616350 526 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 AC007742.2-201ENST00000618226 398 ntBASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2LQ9NUG4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CCM2LQ9NUG4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCM2LQ9NUG4 Y_RNA.146-201ENST00000363549 102 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 RNU6-1227P-201ENST00000383981 107 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 RNU6-790P-201ENST00000384479 105 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 Y_RNA.594-201ENST00000410373 140 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 RNU6-325P-201ENST00000411132 105 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 RPS3AP12-201ENST00000443616 753 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 AC013470.1-201ENST00000453438 462 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 RPL30P15-201ENST00000457129 321 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 RPS29P20-201ENST00000489592 171 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 AK3P2-201ENST00000507976 429 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 RNU6-377P-201ENST00000515965 102 ntBASIC3.65□□□□□ -1.83
CCM2LQ9NUG4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms