Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 RNU6-858P-201ENST00000362436 107 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 RNU4-35P-201ENST00000362588 141 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 RNU6-799P-201ENST00000363567 107 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 U3.12-201ENST00000364498 214 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 MIR490-201ENST00000384865 128 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC023141.4-201ENST00000412031 328 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 RPL21P40-201ENST00000428586 483 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 YME1L1P1-201ENST00000429435 297 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 MTND4LP16-201ENST00000440828 295 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 MTCO2P3-201ENST00000442543 421 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 HMGN1P18-201ENST00000457642 277 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 RNU7-138P-201ENST00000459479 64 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC113155.1-201ENST00000511141 769 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 RNU2-27P-201ENST00000516185 142 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 SNORA64.4-201ENST00000516632 81 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AP004607.1-201ENST00000524456 203 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC006199.1-201ENST00000548728 219 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC025423.5-201ENST00000550230 219 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC005668.1-201ENST00000571142 476 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC005498.1-201ENST00000592125 465 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 AC099778.2-201ENST00000610904 211 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 MIR6134-201ENST00000617606 109 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 SCARNA4-202ENST00000625402 129 ntBASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NECTIN3Q9NQS3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 Y_RNA.279-201ENST00000364763 95 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 RNU6-72P-201ENST00000384285 79 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 RNU6-831P-201ENST00000384548 107 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 SNORD17-201ENST00000390930 237 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 RNU6-1148P-201ENST00000410992 104 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC005019.1-201ENST00000436455 431 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 IFNA20P-201ENST00000436840 528 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AL031274.1-201ENST00000450334 232 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 NIPA2P5-201ENST00000452282 464 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 RN7SL594P-201ENST00000470590 287 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC092185.1-201ENST00000491371 97 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 TRBVA-201ENST00000498804 316 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC008628.2-201ENST00000502605 298 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 RNU6-1332P-201ENST00000516666 104 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC087241.2-201ENST00000535801 324 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC026333.2-201ENST00000542164 106 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC025281.1-201ENST00000567026 265 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 AC123912.5-201ENST00000605470 343 ntBASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NECTIN3Q9NQS3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 RNU6-254P-201ENST00000363377 107 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 RNA5SP139-201ENST00000364340 117 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 MIR183-201ENST00000384958 110 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 MIR518D-201ENST00000385014 87 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 AL161651.1-201ENST00000440882 223 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 MTND5P20-201ENST00000448677 143 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 AC012308.1-201ENST00000451232 178 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 AC006026.2-201ENST00000457376 180 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 AC116655.1-201ENST00000508324 901 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 AC010653.1-201ENST00000571108 881 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.26□□□□□ -1.89
NECTIN3Q9NQS3 AL008636.1-201ENST00000625038 1018 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms