Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC004383.1-201ENST00000438135 289 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 OSTCP8-201ENST00000445117 448 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 HIGD1AP2-201ENST00000446367 280 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 MTND3P16-201ENST00000452205 344 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 RNU7-167P-201ENST00000459160 62 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 DYNLL1P5-201ENST00000467158 270 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 SNORA25.17-201ENST00000517184 124 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 OR11H5P-201ENST00000554039 926 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AC002044.1-201ENST00000606707 158 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 AC069234.5-201ENST00000611056 416 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
CHMP1AQ9HD42 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RNY3P3-201ENST00000363816 102 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 SNORA68.1-201ENST00000364537 132 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RNU4-66P-201ENST00000365199 138 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 SNORD115-47-201ENST00000391226 86 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RNA5SP229-201ENST00000410809 99 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 FCF1P9-201ENST00000412546 282 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AC091390.1-201ENST00000433904 331 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AL121601.2-201ENST00000438019 707 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 CYCSP35-201ENST00000451978 304 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RBMY2UP-201ENST00000453474 324 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RPL21P10-201ENST00000463521 490 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 MRPL42P6-201ENST00000486397 371 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 MTAPP1-201ENST00000489154 819 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AC006445.1-201ENST00000491925 405 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 GZMAP1-201ENST00000503054 631 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 SEM1P1-201ENST00000506694 209 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RNU5F-8P-201ENST00000515941 111 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RN7SKP43-201ENST00000516173 320 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AC011611.1-201ENST00000552179 197 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AC090115.3-201ENST00000553218 849 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AC136619.2-201ENST00000563361 631 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 MTCO3P13-201ENST00000577757 781 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 U3.45-201ENST00000607547 219 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 RMST_7.1-201ENST00000621935 268 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 MIR3688-2-201ENST00000636963 87 ntBASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP1AQ9HD42 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AC004520.1-201ENST00000608362 1413 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 RNA5SP119-201ENST00000362715 117 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 Y_RNA.378-201ENST00000365652 113 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 RNU6-1328P-201ENST00000410938 106 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 ATP5C1P1-201ENST00000441945 895 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 Z96811.1-201ENST00000445880 108 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AC087884.1-201ENST00000469738 328 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 RNU6-718P-201ENST00000516166 105 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 SNORD60.2-201ENST00000516883 86 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 CENPUP1-201ENST00000526649 1202 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 MTND1P35-201ENST00000526739 508 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AC010525.2-201ENST00000590920 195 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 RPL23AP78-201ENST00000599928 470 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AC073657.2-201ENST00000605661 303 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 U2.17-201ENST00000611454 95 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 uc_338.25-201ENST00000613756 156 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 Z69720.2-201ENST00000624755 279 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 MIR6733-201ENST00000635723 61 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 MIR7515-201ENST00000637837 67 ntBASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP1AQ9HD42 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms