Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC092656.1-203ENST00000624134 423 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 ZNF702P-202ENST00000434269 1966 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 HSPE1P11-201ENST00000339579 310 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 Y_RNA.111-201ENST00000363248 100 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 U3.13-201ENST00000364804 214 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 RNU6-925P-201ENST00000384629 104 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AL139156.1-201ENST00000412785 841 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 SRIP2-201ENST00000428470 166 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 CR769776.1-201ENST00000441254 787 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC096638.1-201ENST00000444678 216 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 SSXP1-201ENST00000453640 473 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 UBE2DNL-203ENST00000474922 222 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 RPL9P6-201ENST00000492764 598 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC011979.2-201ENST00000527568 352 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC092325.1-201ENST00000566449 554 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 MIR4435-1-201ENST00000582552 80 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AL139022.2-201ENST00000606934 443 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC064859.1-201ENST00000624741 174 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 ZNF876P-202ENST00000398732 1485 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC106754.1-201ENST00000562632 1513 ntBASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.05□□□□□ -2.08
LRRC40Q9H9A6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RNU1-23P-201ENST00000363361 144 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RNU6-1200P-201ENST00000384162 107 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RPL17P50-201ENST00000396131 546 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 SNORA3.2-201ENST00000408221 125 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RN7SKP32-201ENST00000410167 303 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RPS15AP12-201ENST00000419498 388 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AL139413.1-201ENST00000421309 217 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC096920.1-201ENST00000423991 241 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC027124.2-201ENST00000428249 105 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RPL37P21-201ENST00000435890 276 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 GDI2P2-201ENST00000445131 608 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AL353705.4-201ENST00000449661 238 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AL583843.1-201ENST00000456070 346 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 MTND2P39-201ENST00000457230 764 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 KPNA2P1-201ENST00000458289 1591 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC018868.1-201ENST00000491307 315 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC034114.1-201ENST00000520293 285 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC022616.6-201ENST00000520479 119 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RANP3-201ENST00000530970 276 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC135279.1-201ENST00000543493 504 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC136619.2-201ENST00000563361 631 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 APOOP1-201ENST00000604695 592 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC093788.1-201ENST00000609356 927 ntBASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRRC40Q9H9A6 RNU5E-1-201ENST00000362477 120 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 Y_RNA.97-201ENST00000363094 102 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 RNU6-660P-201ENST00000364566 109 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 RNU6-809P-201ENST00000384461 107 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 RNU1-57P-201ENST00000384491 166 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 RNA5SP508-201ENST00000411327 119 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 DPH3P2-201ENST00000422618 250 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 RPL23AP30-201ENST00000432419 501 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AL008629.1-201ENST00000438615 184 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 DNAJC19P4-201ENST00000440115 345 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 KATNBL1P6-201ENST00000453433 915 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms