Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 HMGB3P12-201ENST00000438745 556 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC009238.1-201ENST00000442165 424 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC009237.6-201ENST00000446969 424 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 RNU6-914P-201ENST00000516749 109 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC008015.1-201ENST00000555505 465 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC090616.2-202ENST00000584248 222 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 WISP1-OT1-201ENST00000602893 642 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AL670379.10-201ENST00000604330 253 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AL670379.9-201ENST00000605428 253 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC087683.2-201ENST00000611384 326 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 AC009233.1-201ENST00000616477 371 ntBASIC2.21□□□□□ -2.06
POLR1EQ9GZS1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 U3.37-201ENST00000408528 213 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 U3.40-201ENST00000408706 208 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 Y_RNA.608-201ENST00000410647 95 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC009518.2-201ENST00000418056 731 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 RPL7P34-201ENST00000433316 712 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC079804.2-201ENST00000490376 200 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 RNU6-759P-201ENST00000516740 103 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AP003122.4-201ENST00000530980 758 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 CYCSP26-201ENST00000534107 320 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC079598.5-201ENST00000547460 117 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC087045.1-201ENST00000605856 382 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC092140.2-201ENST00000618027 521 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AL031601.2-202ENST00000622650 282 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AC138627.2-201ENST00000624202 601 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 AP003400.5-201ENST00000624827 617 ntBASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
POLR1EQ9GZS1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 RNU6-858P-201ENST00000362436 107 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 RNU4-1-201ENST00000363925 141 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 Y_RNA.560-201ENST00000384689 102 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 SNORA40C-201ENST00000391285 128 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 RNA5SP425-201ENST00000410336 112 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC092809.3-201ENST00000415453 231 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC005005.2-201ENST00000420779 380 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AL160275.3-201ENST00000423876 471 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AL031659.1-201ENST00000447075 539 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 PSPHP1-201ENST00000450062 261 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC012308.1-201ENST00000451232 178 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 FABP5P13-201ENST00000452144 328 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 KATNBL1P6-201ENST00000453433 915 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 MTND1P12-201ENST00000455231 147 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AP000797.1-201ENST00000478870 387 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 RNA5SP337-201ENST00000517007 109 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AL157871.3-201ENST00000557231 293 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 MIR1273D-201ENST00000577266 86 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AC007229.1-201ENST00000590455 412 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AL022161.1-201ENST00000604390 213 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 AL031775.1-201ENST00000607014 887 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 RNU6-91P-201ENST00000607774 107 ntBASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
POLR1EQ9GZS1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
POLR1EQ9GZS1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
POLR1EQ9GZS1 RNU5E-5P-201ENST00000365379 116 ntBASIC2.18□□□□□ -2.06
POLR1EQ9GZS1 SNORA4.3-201ENST00000365564 137 ntBASIC2.18□□□□□ -2.06
POLR1EQ9GZS1 Y_RNA.534-201ENST00000384599 112 ntBASIC2.18□□□□□ -2.06
POLR1EQ9GZS1 SNORA3.2-201ENST00000408221 125 ntBASIC2.18□□□□□ -2.06
POLR1EQ9GZS1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms