Protein–RNA interactions for Protein: Q9C098

DCLK3, Serine/threonine-protein kinase DCLK3, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3Q9C098 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.21□□□□□ -1.9
DCLK3Q9C098 AC007998.5-201ENST00000622938 237 ntBASIC3.21□□□□□ -1.9
DCLK3Q9C098 AP003400.5-201ENST00000624827 617 ntBASIC3.21□□□□□ -1.9
DCLK3Q9C098 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DCLK3Q9C098 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DCLK3Q9C098 Y_RNA.111-201ENST00000363248 100 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DCLK3Q9C098 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 XGY1-201ENST00000381172 446 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 Y_RNA.414-201ENST00000384011 101 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 RNU6-190P-201ENST00000384154 102 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 CISD1P1-201ENST00000393907 327 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 FAT1P1-201ENST00000406588 507 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 RNU6-387P-201ENST00000411331 105 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 SCARNA18-201ENST00000459004 134 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 Y_RNA.654-201ENST00000497848 106 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 HMGN1P13-201ENST00000505795 138 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 Y_RNA.689-201ENST00000516589 107 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 AL670379.4-201ENST00000605279 254 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DCLK3Q9C098 AL365204.3-201ENST00000612448 685 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC104237.2-201ENST00000612456 443 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 AL360181.4-201ENST00000621752 134 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC090574.1-201ENST00000623186 233 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.2□□□□□ -1.9
DCLK3Q9C098 AC000403.1-201ENST00000613696 3585 ntBASIC3.2□□□□□ -1.9
DCLK3Q9C098 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
DCLK3Q9C098 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DCLK3Q9C098 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 RNU6-1252P-201ENST00000363054 104 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 RNU6-288P-201ENST00000363690 104 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 Y_RNA.460-201ENST00000384255 102 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 Y_RNA.530-201ENST00000384587 101 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 UBA52P6-201ENST00000399822 382 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 POLHP1-201ENST00000411806 470 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 KLHL2P1-201ENST00000508691 521 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 RNU6-864P-201ENST00000516256 108 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 RNU6-273P-201ENST00000516937 96 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 RN7SKP258-201ENST00000517151 304 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 OR11H5P-201ENST00000554039 926 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 FAM60BP-201ENST00000578364 658 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC092747.3-201ENST00000603769 301 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 Z82243.1-201ENST00000609432 473 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 SCARNA15.3-201ENST00000626315 122 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 SCARNA4.1-201ENST00000628597 123 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 MTND1P37-201ENST00000636562 264 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DCLK3Q9C098 AC103710.2-202ENST00000641454 2853 ntBASIC3.19□□□□□ -1.9
DCLK3Q9C098 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.19□□□□□ -1.9
DCLK3Q9C098 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DCLK3Q9C098 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DCLK3Q9C098 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
DCLK3Q9C098 AL137003.2-201ENST00000606924 2538 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 MTND4P23-201ENST00000447723 1363 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 Y_RNA.301-201ENST00000364990 103 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 DYNLT3P1-201ENST00000378574 347 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AL139039.1-201ENST00000401900 692 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AL356057.2-201ENST00000403318 432 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AL354751.2-201ENST00000415471 210 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 ARL5AP1-201ENST00000418991 388 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 USP9YP20-201ENST00000419224 558 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.18□□□□□ -1.9
DCLK3Q9C098 CALM2P2-201ENST00000428512 440 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AC104058.1-201ENST00000448028 297 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.18□□□□□ -1.9
DCLK3Q9C098 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
DCLK3Q9C098 snoU13.4-201ENST00000458916 104 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 Y_RNA.632-201ENST00000459189 102 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.18□□□□□ -1.9
DCLK3Q9C098 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.18□□□□□ -1.9
DCLK3Q9C098 SNORA19.2-201ENST00000516013 114 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 SNORA31.3-201ENST00000516029 96 ntBASIC3.18□□□□□ -1.9
DCLK3Q9C098 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DCLK3Q9C098 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.18□□□□□ -1.9
DCLK3Q9C098 AP000763.2-201ENST00000540641 163 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms