Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RBBP8P1-201ENST00000449447 1844 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 RNU5E-1-201ENST00000362477 120 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 RNU6-462P-201ENST00000362659 105 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 SNORD114-19-201ENST00000363072 75 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 SNORD116.1-201ENST00000365628 92 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 MIR597-201ENST00000384968 97 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 SNORA40C-201ENST00000391285 128 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 RAC1P6-201ENST00000423911 575 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 HMGN2P3-201ENST00000433603 273 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 HMGN2P5-201ENST00000436882 273 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 RPL7P54-201ENST00000438336 674 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC108059.3-201ENST00000456388 214 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC021146.2-201ENST00000504736 556 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC010587.2-201ENST00000511727 448 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 RNA5SP216-201ENST00000516111 123 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 GNAI2P1-201ENST00000541815 315 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC135279.1-201ENST00000543493 504 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AL356432.3-201ENST00000568952 465 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC021646.1-201ENST00000605469 484 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC108479.2-201ENST00000617314 601 ntBASIC1.25□□□□□ -2.21
NKX6-2Q9C056 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.25□□□□□ -2.21
NKX6-2Q9C056 ZNF876P-202ENST00000398732 1485 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 RNA5SP88-201ENST00000365560 109 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 Y_RNA.465-201ENST00000384293 102 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 RNU6-166P-201ENST00000384371 107 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 ERHP2-201ENST00000402323 299 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 MIR1262-201ENST00000408276 93 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 RNU6-1025P-201ENST00000410629 104 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 RN7SKP101-201ENST00000411376 320 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC016831.2-201ENST00000417179 352 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 MTND2P29-201ENST00000438595 412 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 MED28P2-201ENST00000475771 317 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 RNU2-53P-201ENST00000516257 147 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 Y_RNA.675-201ENST00000516389 149 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AP003392.2-201ENST00000527269 208 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 IMMP1LP2-201ENST00000552954 492 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 RPS3AP4-201ENST00000555161 764 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 MTCYBP33-201ENST00000575007 1130 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 MIR4713-201ENST00000582691 75 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 BNIP3P30-201ENST00000601184 574 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 CLIC4P2-201ENST00000601934 717 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 SEPT7P9-203ENST00000604116 343 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC097468.3-201ENST00000607956 456 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 Z82243.1-201ENST00000609432 473 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AL355472.4-201ENST00000610233 626 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC004908.3-201ENST00000610248 625 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC006386.1-201ENST00000619436 415 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AC092192.1-201ENST00000633154 1018 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 AL161722.3-201ENST00000605789 2983 ntBASIC1.24□□□□□ -2.21
NKX6-2Q9C056 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 RNU6-1274P-201ENST00000384557 107 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 MIR186-201ENST00000384988 86 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 MIR9-3-201ENST00000385084 90 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 TXNL1P1-201ENST00000429528 554 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AL591212.2-201ENST00000433923 257 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 LARP1BP3-201ENST00000437229 869 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 EEF1A1P39-201ENST00000440791 250 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 RNU6-953P-201ENST00000459154 107 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC108043.1-201ENST00000512696 574 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 RNU6-1315P-201ENST00000517187 99 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC013828.2-201ENST00000532487 235 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC023813.2-201ENST00000564321 469 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC022254.1-201ENST00000567857 235 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 MIR3198-2-201ENST00000577868 80 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC103810.8-201ENST00000607347 118 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms