Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AL022400.1-201ENST00000423946 935 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 RNFT1P2-201ENST00000443064 757 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 RPL7P36-201ENST00000444633 681 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AL035666.1-201ENST00000446195 348 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS25Q9BRG1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 RPL26P26-201ENST00000480251 434 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 RNU6-295P-201ENST00000516901 104 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 RNU6-1183P-201ENST00000517054 60 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AC022861.1-201ENST00000522981 663 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AL161670.1-201ENST00000554348 137 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AC104229.1-201ENST00000561364 255 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AC098826.3-201ENST00000603823 466 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AP000860.1-201ENST00000605250 559 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AC107952.2-201ENST00000606048 486 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 AC008759.3-201ENST00000613300 508 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 MIR8065-201ENST00000620577 100 ntBASIC0.66□□□□□ -2.3
VPS25Q9BRG1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS25Q9BRG1 RNU6-28P-201ENST00000362378 107 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 RNU6-512P-201ENST00000364438 103 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 RNU6-343P-201ENST00000364709 104 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 MIR483-201ENST00000385070 76 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 RNU4-26P-201ENST00000410270 107 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 RNU2-64P-201ENST00000411315 191 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 HMGB1P27-201ENST00000431429 603 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 AL096829.2-201ENST00000446582 742 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 RPL23AP35-201ENST00000451906 501 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 SNORD13-201ENST00000459299 104 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 RPL7P43-201ENST00000478876 753 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.65□□□□□ -2.31
VPS25Q9BRG1 AC090615.1-201ENST00000577519 154 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 MIR4255-201ENST00000579351 72 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 MIR3937-201ENST00000580135 106 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 AL021879.1-201ENST00000611756 288 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 AC019226.1-201ENST00000625666 515 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 AC095038.3-201ENST00000634439 195 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 AC010149.2-201ENST00000637608 315 ntBASIC0.65□□□□□ -2.31
VPS25Q9BRG1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 RNU6-1280P-201ENST00000365211 107 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 MIR515-2-201ENST00000384883 83 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 MIR515-1-201ENST00000384884 83 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 LUZP4P1-201ENST00000415420 344 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 GPM6BP2-201ENST00000432046 144 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 GPM6BP1-201ENST00000446387 144 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 RPS29P29-201ENST00000456396 171 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 RPL36AP21-201ENST00000490372 323 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC093852.1-201ENST00000503587 266 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC010486.1-201ENST00000511793 424 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 MTND5P13-201ENST00000513046 1079 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 RNU6-927P-201ENST00000516199 100 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 TRAV32-201ENST00000553993 340 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AF038458.1-201ENST00000588406 262 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC073413.2-201ENST00000604332 360 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 TUG1_2.1-201ENST00000614234 87 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 AC068205.3-201ENST00000636385 468 ntBASIC0.64□□□□□ -2.31
VPS25Q9BRG1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS25Q9BRG1 SNRPEP3-201ENST00000338402 276 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 SNORD114-1-201ENST00000362705 72 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 RNU6-944P-201ENST00000364023 107 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 SNORA4.1-201ENST00000364263 144 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 RNU6-546P-201ENST00000383991 107 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 SNORA25-201ENST00000384384 134 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 U8.13-201ENST00000390842 128 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 RPL23AP32-201ENST00000395315 459 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 COX7BP2-201ENST00000437976 242 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC002542.1-201ENST00000440683 193 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC007000.2-201ENST00000442564 487 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 FABP5P15-201ENST00000453566 214 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 GTF2IP12-201ENST00000456547 356 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC145146.1-201ENST00000496370 254 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 MTCYBP43-201ENST00000513621 740 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 RNU6-390P-201ENST00000516259 103 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 RNU5B-3P-201ENST00000516601 115 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 RNU6-714P-201ENST00000516963 103 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms