Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
VRK1Q99986 RNU1-18P-201ENST00000363062 164 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 SNORA63-201ENST00000363450 132 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 SNORA62.3-201ENST00000365110 153 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 RNU6-596P-201ENST00000365395 98 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 RNU6-827P-201ENST00000365553 106 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AL359837.1-201ENST00000381357 287 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 Y_RNA.395-201ENST00000383945 109 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 RNU6-306P-201ENST00000384617 107 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.47□□□□□ -1.85
VRK1Q99986 RNU6-1304P-201ENST00000411374 106 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
VRK1Q99986 USP9YP30-201ENST00000430729 455 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AL714022.1-201ENST00000439897 151 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.47□□□□□ -1.85
VRK1Q99986 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.47□□□□□ -1.85
VRK1Q99986 MTCO3P10-201ENST00000455912 772 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 RPL30P15-201ENST00000457129 321 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 RN7SL93P-201ENST00000463035 293 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AC018437.1-201ENST00000492214 406 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.47□□□□□ -1.85
VRK1Q99986 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
VRK1Q99986 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.47□□□□□ -1.85
VRK1Q99986 AC093303.1-201ENST00000514549 295 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.47□□□□□ -1.85
VRK1Q99986 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.47□□□□□ -1.85
VRK1Q99986 AC011494.1-201ENST00000596454 237 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AC024153.1-201ENST00000603103 365 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.47□□□□□ -1.85
VRK1Q99986 AC009229.3-201ENST00000608056 282 ntBASIC3.47□□□□□ -1.85
VRK1Q99986 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
VRK1Q99986 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.47□□□□□ -1.85
VRK1Q99986 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.47□□□□□ -1.85
VRK1Q99986 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.47□□□□□ -1.85
VRK1Q99986 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
VRK1Q99986 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VRK1Q99986 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VRK1Q99986 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
VRK1Q99986 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
VRK1Q99986 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VRK1Q99986 RNU6-898P-201ENST00000365627 104 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VRK1Q99986 MIR23B-201ENST00000384832 97 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VRK1Q99986 HMGN2P8-201ENST00000391458 268 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 RPS29P13-201ENST00000402041 169 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 MTHFD2P2-201ENST00000407725 247 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 RNA5SP38-201ENST00000410750 119 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 Y_RNA.646-201ENST00000410980 101 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 RNU6-325P-201ENST00000411132 105 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK1Q99986 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.46□□□□□ -1.86
VRK1Q99986 RPL31P12-201ENST00000422587 358 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.46□□□□□ -1.86
VRK1Q99986 AC236972.1-201ENST00000433225 199 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK1Q99986 AC010099.1-201ENST00000455434 375 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 SNORA84-201ENST00000459229 133 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 snoU13.28-201ENST00000459235 104 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK1Q99986 PTP4A1P4-201ENST00000512479 322 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 RNU6-377P-201ENST00000515965 102 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK1Q99986 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK1Q99986 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.46□□□□□ -1.86
VRK1Q99986 MIR5684-201ENST00000585074 65 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 VN1R107P-201ENST00000601784 209 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.46□□□□□ -1.86
VRK1Q99986 AC138627.2-201ENST00000624202 601 ntBASIC3.46□□□□□ -1.86
VRK1Q99986 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.46□□□□□ -1.86
VRK1Q99986 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
VRK1Q99986 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VRK1Q99986 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VRK1Q99986 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.45□□□□□ -1.86
VRK1Q99986 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VRK1Q99986 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VRK1Q99986 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VRK1Q99986 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VRK1Q99986 RPL9P7-201ENST00000330965 580 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 RNU6-78P-201ENST00000362897 107 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 Y_RNA.197-201ENST00000364004 102 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
VRK1Q99986 Y_RNA.404-201ENST00000383978 102 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.45□□□□□ -1.86
VRK1Q99986 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.45□□□□□ -1.86
VRK1Q99986 AL133396.1-201ENST00000432048 687 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 AL513043.1-201ENST00000439124 535 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 HMGN2P10-201ENST00000448085 265 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 RPL9P9-202ENST00000466501 579 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 RPL23AP14-201ENST00000468281 468 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 RPS29P20-201ENST00000489592 171 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VRK1Q99986 RNU6-1213P-201ENST00000517075 94 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.45□□□□□ -1.86
VRK1Q99986 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.45□□□□□ -1.86
VRK1Q99986 AC091516.1-201ENST00000549191 703 ntBASIC3.45□□□□□ -1.86
VRK1Q99986 AC005476.1-201ENST00000554427 397 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms