Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC006946.1-201ENST00000429106 328 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORA71B-202ENST00000439232 272 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 AC010655.1-201ENST00000449336 292 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 LINC01399-202ENST00000458450 244 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU1-95P-201ENST00000516357 160 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU1-128P-201ENST00000516704 160 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORA81.3-201ENST00000517283 198 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR3133-201ENST00000583157 78 ntBASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP1Q96SZ6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AL359837.1-201ENST00000381357 287 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR215-201ENST00000384858 110 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-130P-201ENST00000411112 103 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RAB9AP3-201ENST00000412737 573 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RPL23AP22-201ENST00000437556 453 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RPS3AP46-201ENST00000448352 682 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RAB9AP1-201ENST00000449393 573 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORD105B-201ENST00000458770 79 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RPL7P5-201ENST00000471472 736 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 TRBVB-201ENST00000477100 408 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AC069499.1-201ENST00000489433 509 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RN7SKP18-201ENST00000516005 275 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RN7SKP209-201ENST00000516888 304 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-182P-201ENST00000516970 105 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AP003733.2-201ENST00000529409 171 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AC005899.2-201ENST00000584353 90 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU1-30P-201ENST00000606575 163 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AP000553.6-201ENST00000641242 118 ntBASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.180-201ENST00000363867 113 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 RNVU1-3-201ENST00000364313 161 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-214P-201ENST00000384130 107 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AL035423.1-201ENST00000420331 213 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AL133396.1-201ENST00000432048 687 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 RPL23AP33-201ENST00000442301 452 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 RPL23AP31-201ENST00000456160 467 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AC008481.1-201ENST00000463278 396 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 RPL17P19-201ENST00000489069 552 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORA40.14-201ENST00000516543 86 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-307P-201ENST00000516743 106 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORA40.15-201ENST00000516884 107 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 IGKV2D-36-201ENST00000518643 226 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 ZNF192P1-203ENST00000565888 810 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORA51-201ENST00000606420 132 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AC012442.3-202ENST00000636742 206 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 ZNF285B-201ENST00000561698 1767 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 AL122126.1-201ENST00000546905 1318 ntBASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP1Q96SZ6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-1284P-201ENST00000363701 100 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.276-201ENST00000364732 109 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-637P-201ENST00000384050 107 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 SNORA5A-201ENST00000384111 134 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-190P-201ENST00000384154 102 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.551-201ENST00000384661 102 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR449B-201ENST00000384995 97 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 PCNPP3-201ENST00000393579 471 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms