Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 CKS1BP2-201ENST00000497342 240 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC008526.1-201ENST00000509149 338 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 RNU6-677P-201ENST00000516914 101 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC090888.2-201ENST00000559765 1144 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 LINC00933-203ENST00000559812 219 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL21A1Q96P44 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC078899.2-201ENST00000595282 212 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 SNORD14A-201ENST00000606526 91 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC092106.3-201ENST00000611308 722 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC012640.5-201ENST00000623897 319 ntBASIC1.88□□□□□ -2.11
COL21A1Q96P44 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.88□□□□□ -2.11
COL21A1Q96P44 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 Y_RNA.46-201ENST00000362695 102 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 RPS12P24-201ENST00000412619 387 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 AL445646.1-201ENST00000431784 216 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 CYP2C59P-201ENST00000457790 269 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 SNORD11.1-201ENST00000459482 85 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC091951.3-201ENST00000504093 246 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AF213884.2-201ENST00000510417 903 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 RANP3-201ENST00000530970 276 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 AL158211.1-201ENST00000566763 763 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 MTATP6P24-201ENST00000576835 677 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC073544.2-201ENST00000601155 540 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC121334.2-201ENST00000605387 271 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC013244.3-201ENST00000605614 388 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC107952.2-201ENST00000606048 486 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 AC110994.2-201ENST00000635481 492 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
COL21A1Q96P44 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL21A1Q96P44 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL21A1Q96P44 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC138393.1-203ENST00000327086 343 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 Y_RNA.269-201ENST00000364685 89 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 RNA5SP125-201ENST00000364843 120 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 RNY3P13-201ENST00000365542 102 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 MIR1287-201ENST00000408492 90 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 RNU4-26P-201ENST00000410270 107 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 RN7SKP158-201ENST00000410453 326 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC097463.2-201ENST00000421074 142 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 RPS27AP14-201ENST00000422868 454 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AL592045.1-201ENST00000429867 352 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 Z73417.1-201ENST00000447373 778 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 BTF3P15-201ENST00000455606 336 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AP001324.2-201ENST00000461163 319 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 DYNLL1P5-201ENST00000467158 270 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 MTND1P3-201ENST00000484956 952 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC023194.1-201ENST00000493084 308 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 RNU5B-3P-201ENST00000516601 115 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 RNU6-1092P-201ENST00000516955 87 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC009977.1-201ENST00000586015 570 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC234772.3-201ENST00000602277 528 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AL031281.1-201ENST00000604049 488 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC007363.1-201ENST00000604736 620 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC068276.1-201ENST00000605793 379 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC107214.2-201ENST00000608204 634 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC063944.3-201ENST00000609969 533 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC021755.4-201ENST00000616620 456 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 MIR5739-201ENST00000619803 80 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC138627.2-201ENST00000624202 601 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 ZNF876P-202ENST00000398732 1485 ntBASIC1.86□□□□□ -2.11
COL21A1Q96P44 AC009487.4-201ENST00000624969 3585 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.85□□□□□ -2.11
COL21A1Q96P44 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL21A1Q96P44 AL354685.2-201ENST00000448218 1447 ntBASIC1.85□□□□□ -2.11
COL21A1Q96P44 RNU6-511P-201ENST00000363496 107 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms