Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 AC006557.5-201ENST00000603126 811 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC138Q96M89 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.38□□□□□ -1.87
CCDC138Q96M89 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC138Q96M89 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC138Q96M89 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC138Q96M89 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC138Q96M89 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 Y_RNA.373-201ENST00000365600 103 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 EIF4E2P1-201ENST00000393781 255 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 RN7SKP111-201ENST00000410349 271 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC126124.2-201ENST00000413542 321 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 PTGES3P4-201ENST00000426243 356 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AP000907.1-201ENST00000428428 510 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 RBMY2UP-201ENST00000453474 324 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 RPL31P41-201ENST00000477967 372 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC069439.1-201ENST00000494739 167 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC007458.1-201ENST00000542812 373 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC020895.1-201ENST00000595362 272 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 RPL23AP78-201ENST00000599928 470 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AL391813.1-201ENST00000603098 260 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AL160281.1-201ENST00000605307 311 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC011890.2-201ENST00000613393 294 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 Z69720.2-201ENST00000624755 279 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 AC032011.1-201ENST00000611703 1549 ntBASIC3.37□□□□□ -1.87
CCDC138Q96M89 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC138Q96M89 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 Y_RNA.167-201ENST00000363735 109 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 MIR490-201ENST00000384865 128 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 MIR218-2-201ENST00000385006 110 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 MIR483-201ENST00000385070 76 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 MIR1289-1-201ENST00000408836 144 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 RPS29P4-201ENST00000414733 161 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AL096701.2-201ENST00000416920 238 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC009969.1-201ENST00000438726 172 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC092473.1-201ENST00000441098 221 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 OSTCP8-201ENST00000445117 448 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 RPL21P23-201ENST00000446654 460 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AL590639.1-201ENST00000456484 337 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 RPL31P58-201ENST00000469001 379 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 MTCYBP18-201ENST00000501056 747 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC138Q96M89 Y_RNA.665-201ENST00000516177 98 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 RNU6-358P-201ENST00000516564 75 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 ACA59.2-201ENST00000517061 156 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AF235103.2-201ENST00000525753 346 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC008121.1-201ENST00000603244 268 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 RBM11P1-201ENST00000604951 799 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC004832.5-201ENST00000608677 401 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC010378.1-201ENST00000619270 362 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 RMST_7.1-201ENST00000621935 268 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC138Q96M89 ZNF519P1-201ENST00000449011 1626 ntBASIC3.36□□□□□ -1.87
CCDC138Q96M89 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC138Q96M89 AC092435.3-201ENST00000565538 3654 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC138Q96M89 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-37P-201ENST00000362692 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-942P-201ENST00000363002 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 Y_RNA.100-201ENST00000363141 102 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-11P-201ENST00000364234 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 U3.12-201ENST00000364498 214 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-7-201ENST00000364784 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-8-201ENST00000365467 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 DYNLT3P1-201ENST00000378574 347 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-25P-201ENST00000383873 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-1-201ENST00000383898 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-48P-201ENST00000384161 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-36P-201ENST00000384172 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-4P-201ENST00000384205 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-5P-201ENST00000384238 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-3P-201ENST00000384314 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-16P-201ENST00000384385 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-15P-201ENST00000384534 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-2-201ENST00000384627 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-29P-201ENST00000384637 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-9-201ENST00000384776 107 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms