Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TRBVA-201ENST00000498804 316 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 MTND3P25-201ENST00000509243 135 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AC091826.1-201ENST00000514065 313 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 SNORA14.1-201ENST00000516113 141 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AC025755.1-201ENST00000521306 278 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 CYCSP27-201ENST00000527643 293 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 MIR2682-201ENST00000580305 110 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 MIR3609-201ENST00000582661 80 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 uc_338.5-201ENST00000611839 155 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AC073308.1-201ENST00000623696 305 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AL359757.2-201ENST00000624309 274 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC068647.1-201ENST00000489539 2265 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 Y_RNA.142-201ENST00000363491 102 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 SNORA7.4-201ENST00000384249 137 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 SNORA54-201ENST00000384281 123 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 RNU6-831P-201ENST00000384548 107 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AL353621.1-201ENST00000418219 243 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 HSPE1P1-201ENST00000421494 318 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC008549.1-201ENST00000512900 643 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 RNU6-928P-201ENST00000516876 104 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 SNORA31.19-201ENST00000517079 126 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC009812.2-201ENST00000517657 457 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC069113.1-201ENST00000517763 267 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC009902.1-201ENST00000519351 183 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 TRAV37-201ENST00000553906 342 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AL163153.1-201ENST00000554223 283 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 MIR4742-201ENST00000581069 85 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC091135.1-201ENST00000585943 307 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AL355598.1-201ENST00000604169 202 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AL022345.1-201ENST00000607292 135 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AL121757.2-201ENST00000611223 313 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC068831.7-201ENST00000616954 363 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AL031601.2-202ENST00000622650 282 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM43Q96BQ3 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 RNU6-266P-201ENST00000364225 107 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 RNU6-607P-201ENST00000411283 108 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 HMGN2P30-201ENST00000423237 256 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC007560.1-201ENST00000426912 237 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 TOMM20P4-201ENST00000427861 435 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 SSXP4-201ENST00000451349 245 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 MTND1P11-201ENST00000456661 876 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 RNU6-329P-201ENST00000459618 107 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC069499.1-201ENST00000489433 509 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 MIR892C-201ENST00000516410 77 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 RNU7-30P-201ENST00000516835 62 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 H3F3AP1-201ENST00000559984 334 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AMZ2P1-203ENST00000565833 850 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC005261.5-201ENST00000596280 355 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 LARP7P1-201ENST00000605576 316 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC002044.1-201ENST00000606707 158 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 AL157817.1-201ENST00000614264 790 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 U6.99-201ENST00000637524 83 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.54□□□□□ -1.84
TRIM43Q96BQ3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms