Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC087854.1-201ENST00000519706 414 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 H3F3AP1-201ENST00000559984 334 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.69□□□□□ -1.82
HPS3Q969F9 MIR5195-201ENST00000583555 115 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 AC009994.1-201ENST00000606889 253 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 uc_338.5-201ENST00000611839 155 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.69□□□□□ -1.82
HPS3Q969F9 U6.105-201ENST00000637379 88 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HPS3Q969F9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HPS3Q969F9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.69□□□□□ -1.82
HPS3Q969F9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HPS3Q969F9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HPS3Q969F9 RNU6-778P-201ENST00000363269 103 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 RNU6-254P-201ENST00000363377 107 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 MIR10A-201ENST00000385043 110 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 MIR450B-201ENST00000401182 78 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 AL592148.1-201ENST00000413568 445 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 CYCSP33-201ENST00000414485 327 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.68□□□□□ -1.82
HPS3Q969F9 AL671855.1-201ENST00000446875 1203 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.68□□□□□ -1.82
HPS3Q969F9 PPP1R2P5-201ENST00000457256 603 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.68□□□□□ -1.82
HPS3Q969F9 AC114781.4-201ENST00000513707 639 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 RNU1-86P-201ENST00000516108 154 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 RNU1-107P-201ENST00000516617 154 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 SNORA25.17-201ENST00000517184 124 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 RNU6-323P-201ENST00000521915 107 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.68□□□□□ -1.82
HPS3Q969F9 AP000867.2-201ENST00000532468 320 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 AL163153.1-201ENST00000554223 283 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 AC037471.2-201ENST00000564941 598 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 MIR4742-201ENST00000581069 85 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.68□□□□□ -1.82
HPS3Q969F9 MIR7153-201ENST00000637758 57 ntBASIC3.68□□□□□ -1.82
HPS3Q969F9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
HPS3Q969F9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
HPS3Q969F9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.68□□□□□ -1.82
HPS3Q969F9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.68□□□□□ -1.82
HPS3Q969F9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.68□□□□□ -1.82
HPS3Q969F9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HPS3Q969F9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.67□□□□□ -1.82
HPS3Q969F9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HPS3Q969F9 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 RNU6-1252P-201ENST00000363054 104 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 Y_RNA.142-201ENST00000363491 102 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 RNA5SP50-201ENST00000363731 107 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 SNORD14B-201ENST00000364533 90 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 RAP1BP3-201ENST00000407180 549 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 NCOR1P3-201ENST00000420479 303 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 RPL31P12-201ENST00000422587 358 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 AC010099.1-201ENST00000455434 375 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 RNU7-66P-201ENST00000459469 62 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 RPL23AP67-201ENST00000465341 474 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.67□□□□□ -1.82
HPS3Q969F9 RNU6-864P-201ENST00000516256 108 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.67□□□□□ -1.82
HPS3Q969F9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.67□□□□□ -1.82
HPS3Q969F9 MIR5692C1-201ENST00000585309 91 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 AC091135.1-201ENST00000585943 307 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.67□□□□□ -1.82
HPS3Q969F9 AC006557.5-201ENST00000603126 811 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 NUTF2P8-201ENST00000604593 363 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 MIR7975-201ENST00000619350 68 ntBASIC3.67□□□□□ -1.82
HPS3Q969F9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.67□□□□□ -1.82
HPS3Q969F9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.67□□□□□ -1.82
HPS3Q969F9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HPS3Q969F9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS3Q969F9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HPS3Q969F9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HPS3Q969F9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HPS3Q969F9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HPS3Q969F9 RN7SKP111-201ENST00000410349 271 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS3Q969F9 RPS15AP6-201ENST00000420703 385 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 SKA2P1-201ENST00000425592 390 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 AL159987.2-201ENST00000432754 307 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS3Q969F9 SNRPEP8-201ENST00000442866 260 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.66□□□□□ -1.82
HPS3Q969F9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS3Q969F9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS3Q969F9 MTND1P11-201ENST00000456661 876 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 RNU7-138P-201ENST00000459479 64 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 AC117503.1-201ENST00000472241 394 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS3Q969F9 PHBP14-201ENST00000512887 367 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 RNU6-256P-201ENST00000516747 97 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HPS3Q969F9 AP000889.2-201ENST00000532684 490 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS3Q969F9 AL391261.3-201ENST00000557194 520 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 LINC00933-203ENST00000559812 219 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 AC026464.5-201ENST00000562497 722 ntBASIC3.66□□□□□ -1.82
HPS3Q969F9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms