Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3□□□□□ -1.93
SNED1Q8TER0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNED1Q8TER0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3□□□□□ -1.93
SNED1Q8TER0 MIR3118-1-201ENST00000581787 76 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AC005498.1-201ENST00000592125 465 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3□□□□□ -1.93
SNED1Q8TER0 AC068831.7-201ENST00000616954 363 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 USP12-203ENST00000620323 349 ntTSL 3 BASIC3□□□□□ -1.93
SNED1Q8TER0 AC100810.6-201ENST00000638068 285 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 Y_RNA.157-201ENST00000363638 102 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 RNA5SP456-201ENST00000364002 114 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 Y_RNA.419-201ENST00000384041 102 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 RNU6-482P-201ENST00000391068 107 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC016769.3-201ENST00000396562 315 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AL137014.1-201ENST00000420490 1226 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC119618.1-201ENST00000434191 222 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 RPL7P12-201ENST00000446719 750 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 RNU6-261P-201ENST00000459506 102 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC008716.1-201ENST00000511084 513 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC022432.1-201ENST00000595739 310 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC046143.2-201ENST00000609789 160 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 AC009318.4-201ENST00000620496 486 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 AL160413.1-201ENST00000622780 310 ntBASIC2.99□□□□□ -1.93
SNED1Q8TER0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.99□□□□□ -1.93
SNED1Q8TER0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 FRG1BP-201ENST00000278882 761 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNU6-359P-201ENST00000365466 108 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNU1-73P-201ENST00000383971 164 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNA5SP210-201ENST00000391034 120 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNU6-1158P-201ENST00000391167 107 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNU2-9P-201ENST00000410194 145 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNU6-712P-201ENST00000410558 100 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 DPH3P2-201ENST00000422618 250 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 HIGD1AP11-201ENST00000438361 280 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AL353705.4-201ENST00000449661 238 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 HMGN2P13-201ENST00000476476 274 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC108210.2-201ENST00000503681 201 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC093767.1-201ENST00000504523 156 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNU7-30P-201ENST00000516835 62 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 RNU6-835P-201ENST00000516974 104 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AP003072.1-201ENST00000531740 145 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC091953.2-201ENST00000623979 160 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 MIR1291-201ENST00000627649 87 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNED1Q8TER0 MTND5P27-201ENST00000428871 1720 ntBASIC2.98□□□□□ -1.93
SNED1Q8TER0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNED1Q8TER0 AC090740.1-201ENST00000623193 2262 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNED1Q8TER0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.97□□□□□ -1.93
SNED1Q8TER0 NACAP2-201ENST00000318548 624 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 Y_RNA.67-201ENST00000362870 100 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 RNU6-343P-201ENST00000364709 104 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 Y_RNA.326-201ENST00000365176 113 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 RNU6-169P-201ENST00000365336 107 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 SNORD82-201ENST00000365530 70 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 SNORA32.2-201ENST00000384049 122 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SNED1Q8TER0 RN7SKP32-201ENST00000410167 303 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 AC007064.1-201ENST00000412238 351 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 AL354751.2-201ENST00000415471 210 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.97□□□□□ -1.93
SNED1Q8TER0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.97□□□□□ -1.93
SNED1Q8TER0 MTCO2P12-201ENST00000427426 682 ntBASIC2.97□□□□□ -1.93
SNED1Q8TER0 NDUFA5P4-201ENST00000436704 385 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms