Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AL391261.4-201ENST00000616012 481 ntBASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 AC007792.1-201ENST00000623023 402 ntBASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 AC118273.1-201ENST00000525324 3006 ntBASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 USP8P1-201ENST00000494673 3183 ntBASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.93□□□□□ -1.78
SH3RF2Q8TEC5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-50P-201ENST00000362356 103 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 SNORA63.1-201ENST00000362493 131 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 Y_RNA.47-201ENST00000362697 108 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 SNORD46.1-201ENST00000364139 104 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-1317P-201ENST00000364582 104 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 Y_RNA.424-201ENST00000384063 103 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AL138885.1-201ENST00000405921 675 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 HMGB3P2-201ENST00000411913 584 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC098614.2-201ENST00000426040 255 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 SNRPEP9-201ENST00000436794 238 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 RPL21P104-201ENST00000464143 478 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC022447.4-201ENST00000504053 364 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 RNA5SP468-201ENST00000516782 93 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 RNU7-4P-201ENST00000516961 62 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC022616.4-201ENST00000522985 181 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AP004242.1-201ENST00000533701 349 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC113195.1-201ENST00000579952 141 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC009314.1-201ENST00000603871 304 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC016727.2-201ENST00000603988 621 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC104695.3-201ENST00000604052 296 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC136601.2-201ENST00000604356 474 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC004805.2-201ENST00000605382 482 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 MIR3976-201ENST00000606807 139 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 U4.1-201ENST00000620349 87 ntBASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.92□□□□□ -1.78
SH3RF2Q8TEC5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 MAPK10-372ENST00000641954 3413 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-600P-201ENST00000362524 99 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNY1P16-201ENST00000363063 111 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-827P-201ENST00000365553 106 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 Y_RNA.380-201ENST00000365663 111 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-574P-201ENST00000384265 107 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-166P-201ENST00000384371 107 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 MIR568-201ENST00000385036 95 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 Y_RNA.645-201ENST00000391229 102 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 EIF4EP2-201ENST00000422816 654 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 HMGN2P31-201ENST00000432430 273 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AL451050.1-201ENST00000450126 415 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AC092798.1-201ENST00000458542 409 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 MTATP8P1-201ENST00000467115 207 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RPL7P49-201ENST00000471402 708 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RPL23AP45-201ENST00000476406 468 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RPL30P5-201ENST00000494923 336 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 MRPS35P2-201ENST00000508242 191 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU4-77P-201ENST00000516692 156 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU6-1282P-201ENST00000516735 96 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 HSBP1P1-201ENST00000555205 166 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 RNU1-30P-201ENST00000606575 163 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 AC012314.7-201ENST00000619693 93 ntBASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SH3RF2Q8TEC5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.9□□□□□ -1.78
SH3RF2Q8TEC5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.78
SH3RF2Q8TEC5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SH3RF2Q8TEC5 CDC27P3-201ENST00000635418 1910 ntBASIC3.9□□□□□ -1.78
SH3RF2Q8TEC5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms