Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SNORA44-201ENST00000384584 132 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 RNU6-14P-201ENST00000384630 106 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 MIR606-201ENST00000384851 96 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 MIR483-201ENST00000385070 76 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 UBA52P6-201ENST00000399822 382 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 RNU6-712P-201ENST00000410558 100 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC099677.1-201ENST00000420575 175 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 Z82205.1-201ENST00000428456 297 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 RPS15AP27-201ENST00000449183 343 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.635-201ENST00000459041 101 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 RPL23AP62-201ENST00000463396 453 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 RPL21P8-201ENST00000465083 535 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC083906.5-201ENST00000503722 328 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 SCARNA13-201ENST00000516672 275 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 RNU4-60P-201ENST00000517239 135 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 APOOP3-201ENST00000536787 586 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC010680.4-201ENST00000605334 543 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AL627309.6-201ENST00000606857 840 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 MIR369-201ENST00000362155 70 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.187-201ENST00000363918 113 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 SNORD116-11-201ENST00000383882 92 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.422-201ENST00000384054 114 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 RNY4P36-201ENST00000391116 96 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 MIR548F5-201ENST00000408421 86 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AL137014.1-201ENST00000420490 1226 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC004866.2-201ENST00000438285 481 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 RPS3AP12-201ENST00000443616 753 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC107399.1-201ENST00000451226 265 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.631-201ENST00000459607 101 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC003982.1-202ENST00000469928 248 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 RPL23AP55-201ENST00000498163 452 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 TRBVA-201ENST00000498804 316 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 RNU6-256P-201ENST00000516747 97 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.711-201ENST00000516993 102 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC107016.2-201ENST00000547968 190 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 TRAV37-201ENST00000553906 342 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 CYCSP39-201ENST00000565821 309 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 RPL23AP84-201ENST00000571193 464 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AF038458.1-201ENST00000588406 262 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC023043.2-201ENST00000589678 1026 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC092747.3-201ENST00000603769 301 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AP001330.4-201ENST00000604350 154 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AC009570.1-201ENST00000609599 745 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 DUSP12P1-201ENST00000612874 516 ntBASIC3.05□□□□□ -1.92
LMO3Q8TAP4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LMO3Q8TAP4 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.04□□□□□ -1.92
LMO3Q8TAP4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO3Q8TAP4 RPL9P7-201ENST00000330965 580 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 RNU6-1252P-201ENST00000363054 104 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.197-201ENST00000364004 102 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.202-201ENST00000364083 110 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.216-201ENST00000364205 93 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 SNORA18.3-201ENST00000384122 132 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 SNORA9-201ENST00000384215 133 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LMO3Q8TAP4 SNORA16.2-201ENST00000390991 127 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 AL360182.1-201ENST00000397433 468 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 MTCYBP4-201ENST00000401524 249 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 AL139397.2-201ENST00000404529 772 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO3Q8TAP4 BX682237.1-201ENST00000415016 335 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 SKA2P1-201ENST00000425592 390 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.04□□□□□ -1.92
LMO3Q8TAP4 AL163540.1-201ENST00000485382 386 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 AC090096.1-201ENST00000489168 390 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 AP001086.1-201ENST00000494882 321 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.04□□□□□ -1.92
LMO3Q8TAP4 RNU6-189P-201ENST00000516120 101 ntBASIC3.04□□□□□ -1.92
LMO3Q8TAP4 SNORA31.22-201ENST00000517204 135 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms