Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 KPNA2P1-201ENST00000458289 1591 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 MTND5P10-201ENST00000603719 1809 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE4Q8N205 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE4Q8N205 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE4Q8N205 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 RNU6-629P-201ENST00000384061 103 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 RNU6-432P-201ENST00000384196 109 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 RNU6-754P-201ENST00000391166 107 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 RN7SKP220-201ENST00000410611 288 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 AC018865.2-201ENST00000423631 129 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 AL035666.1-201ENST00000446195 348 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 AC104058.1-201ENST00000448028 297 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 DYNLL1P5-201ENST00000467158 270 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 RPS29P26-201ENST00000477483 171 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 AC008526.1-201ENST00000509149 338 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 RNA5SP356-201ENST00000515972 94 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 RNU6-120P-201ENST00000516077 103 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE4Q8N205 H3F3AP1-201ENST00000559984 334 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 AC004696.1-201ENST00000614345 607 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 AC103705.1-201ENST00000619013 241 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE4Q8N205 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.93□□□□□ -1.78
SYNE4Q8N205 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SYNE4Q8N205 RNU6-82P-201ENST00000363970 107 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 RNU6-960P-201ENST00000364056 120 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 U3.15-201ENST00000365398 212 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 RNU6-890P-201ENST00000384121 107 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 RNU6-784P-201ENST00000384330 106 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 Y_RNA.482-201ENST00000384377 111 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 Y_RNA.496-201ENST00000384444 101 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 Y_RNA.527-201ENST00000384573 102 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 SNORA16.2-201ENST00000390991 127 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 EIF4E2P1-201ENST00000393781 255 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 RNU6-985P-201ENST00000410182 104 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC244098.2-201ENST00000422068 99 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 CALM2P2-201ENST00000428512 440 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 RPL21P112-201ENST00000434403 463 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 RPL35AP22-201ENST00000436855 335 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC104472.2-201ENST00000469035 601 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC087884.1-201ENST00000469738 328 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC021205.2-201ENST00000480069 347 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 RPL39P5-202ENST00000512505 151 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 MTCO2P24-201ENST00000515611 426 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 RNU6-189P-201ENST00000516120 101 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC110588.1-201ENST00000559699 137 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC025946.2-201ENST00000603398 234 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 CYP2C61P-201ENST00000604072 290 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 MIR6130-201ENST00000619419 109 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC005183.1-201ENST00000603687 1979 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SYNE4Q8N205 AP001486.2-201ENST00000561652 5113 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
SYNE4Q8N205 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SYNE4Q8N205 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 RNU6-1318P-201ENST00000365389 103 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 RNU6-1040P-201ENST00000383974 107 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 Y_RNA.404-201ENST00000383978 102 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 Y_RNA.452-201ENST00000384202 108 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AL109755.1-201ENST00000401791 649 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 RNU4-65P-201ENST00000410473 140 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 RNU4-46P-201ENST00000410818 138 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 HMGB3P2-201ENST00000411913 584 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC099677.1-201ENST00000420575 175 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 RPL7P37-201ENST00000425095 738 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC079780.1-201ENST00000428259 207 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC117503.1-201ENST00000472241 394 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNE4Q8N205 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC090115.3-201ENST00000553218 849 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC008269.2-201ENST00000561915 1105 ntBASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE4Q8N205 MIR3668-201ENST00000582138 75 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms