Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC116347.2-201ENST00000514912 523 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 SNORA31.3-201ENST00000516029 96 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 RNU6-1003P-201ENST00000517099 105 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AP006587.4-201ENST00000526053 529 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 ELOCP32-201ENST00000548625 324 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC006199.1-201ENST00000548728 219 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 MIR3146-201ENST00000580367 79 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 MIR4765-201ENST00000585007 77 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC005034.5-201ENST00000604219 466 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC108747.1-201ENST00000609508 535 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC110994.2-201ENST00000635481 492 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 HSPA8P4-201ENST00000511877 1920 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.9□□□□□ -2.1
CDKL3Q8IVW4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 RNY3P13-201ENST00000365542 102 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 RPS20P2-201ENST00000402520 389 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC019129.1-201ENST00000403786 261 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AL021407.1-201ENST00000404531 386 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 RPL23AP39-201ENST00000415533 405 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 RPS3AP44-201ENST00000425466 790 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 ISCA1P1-201ENST00000426679 387 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AL451074.3-201ENST00000437709 472 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC007182.2-201ENST00000489251 402 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 RNA5SP112-201ENST00000515937 99 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 RN7SKP265-201ENST00000516448 223 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC123904.2-201ENST00000548059 300 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC021739.1-201ENST00000559631 174 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC234772.3-201ENST00000602277 528 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC068276.1-201ENST00000605793 379 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC011939.3-201ENST00000613686 466 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 U4atac.1-201ENST00000618345 95 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AC007671.2-201ENST00000637344 619 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 AP006437.1-201ENST00000641440 3685 ntBASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDKL3Q8IVW4 RNU6-809P-201ENST00000384461 107 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 MIR147B-201ENST00000390185 80 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 RPS27AP14-201ENST00000422868 454 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AL353729.1-201ENST00000425044 720 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 RPL37P21-201ENST00000435890 276 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AL161651.1-201ENST00000440882 223 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AC008526.1-201ENST00000509149 338 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 RNU6-678P-201ENST00000516832 109 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 MIR3167-201ENST00000579623 85 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AP001981.2-201ENST00000603241 418 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AC091152.3-201ENST00000604227 325 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 PISRT1-201ENST00000626175 531 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 AC092192.1-201ENST00000633154 1018 ntBASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.89□□□□□ -2.11
CDKL3Q8IVW4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC103710.2-202ENST00000641454 2853 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 RNU6-1159P-201ENST00000362933 107 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 RNU6-14P-201ENST00000384630 106 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AL079342.1-201ENST00000401460 267 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 FABP5P14-201ENST00000437273 393 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 RPL22P17-201ENST00000438729 315 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AL353689.1-201ENST00000438895 199 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 NEFMP1-201ENST00000443423 1006 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 FABP5P13-201ENST00000452144 328 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC139453.3-201ENST00000493276 369 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC107393.1-201ENST00000512403 346 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 RNU6-201P-201ENST00000517100 61 ntBASIC1.88□□□□□ -2.11
CDKL3Q8IVW4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms