Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 ZNF861P-201ENST00000588126 639 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
KRT28Q7Z3Y7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AC103710.2-202ENST00000641454 2853 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AC007256.1-201ENST00000392253 2765 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-741P-201ENST00000383889 107 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 Y_RNA.390-201ENST00000383932 102 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-550P-201ENST00000391057 101 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-876P-201ENST00000391295 104 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RNU4-46P-201ENST00000410818 138 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 Z85995.1-201ENST00000415547 335 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 NEK4P1-201ENST00000433383 879 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AL513043.1-201ENST00000439124 535 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RPL7P5-201ENST00000471472 736 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RPS15AP34-201ENST00000487776 387 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 HMGB3P15-201ENST00000507326 574 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AC098591.2-201ENST00000510152 315 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-358P-201ENST00000516564 75 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 RNA5SP471-201ENST00000516971 106 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 SYF2P1-201ENST00000550658 413 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AL158827.2-201ENST00000602494 330 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AL110115.1-201ENST00000614396 364 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 DUXAP9-208ENST00000622815 614 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AC009033.1-201ENST00000624279 431 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AL691447.3-201ENST00000635020 330 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 AL354685.2-201ENST00000448218 1447 ntBASIC3.67□□□□□ -1.82
KRT28Q7Z3Y7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 CASC19-280ENST00000642102 1351 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 U3.6-201ENST00000363622 211 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AL139397.2-201ENST00000404529 772 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 RNU6-685P-201ENST00000517088 95 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 MTND4P7-201ENST00000523876 130 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 SUB1P1-201ENST00000524415 382 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 MIR548S-201ENST00000581352 82 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AC010525.2-201ENST00000590920 195 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 RMST_8.1-201ENST00000610287 165 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 SNORA50A-202ENST00000629536 136 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AC099654.14-201ENST00000638599 341 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 OR4G1P-203ENST00000641984 1631 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 AC007785.2-201ENST00000598627 1916 ntBASIC3.66□□□□□ -1.82
KRT28Q7Z3Y7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
KRT28Q7Z3Y7 Y_RNA.238-201ENST00000364441 102 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 RNU4-66P-201ENST00000365199 138 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 RNY3P14-201ENST00000384309 102 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 MIR592-201ENST00000384959 97 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 MIR325-201ENST00000385260 98 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 RNU6-373P-201ENST00000411247 98 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 RPS15AP6-201ENST00000420703 385 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 AL592045.1-201ENST00000429867 352 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 AC104058.1-201ENST00000448028 297 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 AC025465.4-201ENST00000513422 638 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 RNU6-914P-201ENST00000516749 109 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 AL138976.2-201ENST00000563989 694 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 AL161798.1-201ENST00000604630 131 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 MIR15A-201ENST00000607334 83 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 RMST_3.1-201ENST00000611651 109 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 AL512643.1-201ENST00000635735 524 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 MTND1P37-201ENST00000636562 264 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 AC091152.2-201ENST00000591628 2569 ntBASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT28Q7Z3Y7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AC092435.3-201ENST00000565538 3654 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 SNORA46-201ENST00000384762 135 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AL591034.1-201ENST00000407447 340 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 RNU2-33P-201ENST00000410344 192 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 RNA5SP118-201ENST00000410385 109 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms