Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL391261.3-201ENST00000557194 520 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 MIR4697-201ENST00000582977 78 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 MIR3672-201ENST00000584290 82 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC012468.1-201ENST00000604888 430 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 uc_338.5-201ENST00000611839 155 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 AL157817.1-201ENST00000614264 790 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 AL136164.4-201ENST00000625013 2135 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 AC099654.5-201ENST00000636479 350 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 TPTEP1-208ENST00000636884 213 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 U6.99-201ENST00000637524 83 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SHFQ7M4L6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHFQ7M4L6 FAM35CP-201ENST00000554755 2470 ntBASIC2.91□□□□□ -1.94
SHFQ7M4L6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
SHFQ7M4L6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
SHFQ7M4L6 AC138393.1-203ENST00000327086 343 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 RNU6-658P-201ENST00000384606 106 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 MIR10A-201ENST00000385043 110 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL031121.1-201ENST00000406553 254 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 RPL26P27-201ENST00000414397 437 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 VN1R36P-201ENST00000414936 291 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC245054.2-201ENST00000415639 319 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL353729.1-201ENST00000425044 720 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC093019.1-201ENST00000443135 252 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 MTATP6P7-201ENST00000453315 681 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC233279.1-201ENST00000455300 423 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AMD1P1-201ENST00000457220 922 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 snoU13.28-201ENST00000459235 104 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.9□□□□□ -1.95
SHFQ7M4L6 RNU6-273P-201ENST00000516937 96 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 RNU6-323P-201ENST00000521915 107 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AP000867.2-201ENST00000532468 320 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.9□□□□□ -1.95
SHFQ7M4L6 CYCSP39-201ENST00000565821 309 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL355598.1-201ENST00000604169 202 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL670379.10-201ENST00000604330 253 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 APOOP1-201ENST00000604695 592 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 MTND4LP5-201ENST00000605152 292 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL670379.9-201ENST00000605428 253 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AL138880.2-201ENST00000616214 239 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC073308.1-201ENST00000623696 305 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SHFQ7M4L6 AC093831.2-201ENST00000624393 3427 ntBASIC2.9□□□□□ -1.95
SHFQ7M4L6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.9□□□□□ -1.95
SHFQ7M4L6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SHFQ7M4L6 MTND5P19-201ENST00000424872 1794 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHFQ7M4L6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHFQ7M4L6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHFQ7M4L6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 RNA5SP124-201ENST00000362739 110 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 RNU6-1013P-201ENST00000384180 107 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 Y_RNA.529-201ENST00000384586 119 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AL356057.2-201ENST00000403318 432 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 RAB9AP3-201ENST00000412737 573 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 SYF2P2-201ENST00000417620 583 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 PGBD4P6-201ENST00000421501 610 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 HMGB1P9-201ENST00000429856 646 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 HMGB1P18-201ENST00000438801 619 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 MTND4LP16-201ENST00000440828 295 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 RAB9AP1-201ENST00000449393 573 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 RPS27AP10-201ENST00000496103 208 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC105029.1-201ENST00000520250 669 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC005668.1-201ENST00000571142 476 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 RPS3AP23-202ENST00000574601 686 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 MIR4782-201ENST00000577987 79 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC023043.2-201ENST00000589678 1026 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 C8orf59P2-201ENST00000603441 271 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AL645944.1-201ENST00000603857 493 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 NUTF2P8-201ENST00000604593 363 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC123912.5-201ENST00000605470 343 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.89□□□□□ -1.95
SHFQ7M4L6 AL138726.1-201ENST00000614873 333 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AL034408.1-202ENST00000636088 415 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 AC112487.2-201ENST00000637950 304 ntBASIC2.89□□□□□ -1.95
SHFQ7M4L6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms