Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RAC1P7-201ENST00000445367 377 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 HMGN2P16-201ENST00000456802 261 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 AC126389.1-201ENST00000477436 290 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 AC092436.1-201ENST00000506450 503 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 AC091885.1-201ENST00000506658 268 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 AC104619.4-201ENST00000510773 249 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 MTCO3P44-201ENST00000510977 541 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.07□□□□□ -1.92
USP43Q70EL4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.07□□□□□ -1.92
USP43Q70EL4 RANP9-201ENST00000519957 271 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.07□□□□□ -1.92
USP43Q70EL4 AL118558.2-201ENST00000556294 238 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.07□□□□□ -1.92
USP43Q70EL4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.07□□□□□ -1.92
USP43Q70EL4 HMGN2P28-201ENST00000606102 262 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP43Q70EL4 uc_338.11-201ENST00000619132 160 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.07□□□□□ -1.92
USP43Q70EL4 MTND5P10-201ENST00000603719 1809 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP43Q70EL4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.07□□□□□ -1.92
USP43Q70EL4 AC002546.1-201ENST00000588041 2504 ntBASIC3.07□□□□□ -1.92
USP43Q70EL4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
USP43Q70EL4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.06□□□□□ -1.92
USP43Q70EL4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 RNU6-552P-201ENST00000362869 119 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 SNORA51.4-201ENST00000364993 124 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 Y_RNA.373-201ENST00000365600 103 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.06□□□□□ -1.92
USP43Q70EL4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
USP43Q70EL4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
USP43Q70EL4 Y_RNA.414-201ENST00000384011 101 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 Y_RNA.645-201ENST00000391229 102 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 U3.29-201ENST00000391296 212 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AL139397.2-201ENST00000404529 772 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.06□□□□□ -1.92
USP43Q70EL4 AL158156.1-201ENST00000422509 473 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.06□□□□□ -1.92
USP43Q70EL4 OR2AS1P-201ENST00000427827 319 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.06□□□□□ -1.92
USP43Q70EL4 ARL5AP4-201ENST00000430731 512 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 PRPS1P1-201ENST00000445305 876 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 RPL12P25-201ENST00000455592 494 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC108059.3-201ENST00000456388 214 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.06□□□□□ -1.92
USP43Q70EL4 RPL23AP11-201ENST00000475260 469 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.06□□□□□ -1.92
USP43Q70EL4 RPL21P99-201ENST00000480369 423 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC104564.1-201ENST00000493028 407 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.06□□□□□ -1.92
USP43Q70EL4 MRPS35P2-201ENST00000508242 191 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.06□□□□□ -1.92
USP43Q70EL4 RNU6-976P-201ENST00000516086 111 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.06□□□□□ -1.92
USP43Q70EL4 AC087854.1-201ENST00000519706 414 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
USP43Q70EL4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.06□□□□□ -1.92
USP43Q70EL4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 AC011979.2-201ENST00000527568 352 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.06□□□□□ -1.92
USP43Q70EL4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 AP002404.1-201ENST00000532005 451 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USP43Q70EL4 IMMP1LP2-201ENST00000552954 492 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 MIR4474-201ENST00000579189 78 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 MIR3200-201ENST00000580767 85 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.06□□□□□ -1.92
USP43Q70EL4 BNIP3P25-201ENST00000596023 559 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC104695.3-201ENST00000604052 296 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 IGHV3-29-201ENST00000604817 344 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC018462.2-201ENST00000605375 395 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.06□□□□□ -1.92
USP43Q70EL4 RNU1-30P-201ENST00000606575 163 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AP001486.3-201ENST00000615334 372 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC137590.2-201ENST00000619709 240 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AC243312.2-201ENST00000623340 601 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 AL136164.4-201ENST00000625013 2135 ntBASIC3.06□□□□□ -1.92
USP43Q70EL4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.06□□□□□ -1.92
USP43Q70EL4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.06□□□□□ -1.92
USP43Q70EL4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP43Q70EL4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.05□□□□□ -1.92
USP43Q70EL4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.05□□□□□ -1.92
USP43Q70EL4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP43Q70EL4 RNU6-310P-201ENST00000384655 107 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 SAR1AP2-201ENST00000392696 594 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP43Q70EL4 RNU2-15P-201ENST00000410692 191 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC074085.1-201ENST00000413598 418 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 SDAD1P3-201ENST00000427380 333 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AC096644.2-201ENST00000429278 159 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 CYCSP4-201ENST00000429682 331 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 VDAC1P3-201ENST00000434069 851 ntBASIC3.05□□□□□ -1.92
USP43Q70EL4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms