Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC025588.2-201ENST00000604851 466 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC013470.4-201ENST00000619978 986 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC110792.3-201ENST00000595906 1614 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 GDI2P1-201ENST00000429312 1336 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 MIR604-201ENST00000384880 94 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 RAP1BP2-201ENST00000478270 544 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 MIR7157-201ENST00000635801 60 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 RNU6-26P-201ENST00000383985 107 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 RNU6-748P-201ENST00000384648 107 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AL135790.2-201ENST00000437701 267 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 snoU13.4-201ENST00000458916 104 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 RPS26P55-201ENST00000471178 356 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 EIF1P4-201ENST00000572664 335 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 AC100812.1-201ENST00000607622 580 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 uc_338.17-201ENST00000619633 179 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 MTND4P14-201ENST00000435799 1354 ntBASIC0.04□□□□□ -2.4
VPS13DQ5THJ4 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 SNORD3E-201ENST00000362899 217 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 SNORA32.3-201ENST00000384772 121 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 RPS15AP40-201ENST00000419621 391 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 USP9YP26-201ENST00000421008 661 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 USP9YP18-201ENST00000425912 695 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 USP9YP24-201ENST00000434374 697 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 USP9YP17-201ENST00000444617 696 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC007834.2-201ENST00000536310 343 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AL512506.2-201ENST00000624472 458 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC244505.3-201ENST00000454598 187 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 BOLA3P3-201ENST00000505182 232 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 MIR4645-201ENST00000583158 77 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC139769.3-201ENST00000618383 175 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AL355615.1-201ENST00000406187 641 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 RPS3AP37-201ENST00000419176 745 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC027119.1-201ENST00000440877 241 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 OR5H6-203ENST00000642105 978 ntBASIC0.03□□□□□ -2.4
VPS13DQ5THJ4 AC092634.2-201ENST00000428146 1010 ntBASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 AL133373.1-201ENST00000497098 94 ntBASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 MTND2P26-201ENST00000528255 1029 ntBASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 AP001596.2-201ENST00000608410 312 ntBASIC0.03□□□□□ -2.41
VPS13DQ5THJ4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 RNU1-119P-201ENST00000391122 165 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC107626.1-201ENST00000471084 183 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC107953.1-201ENST00000522216 297 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC012435.1-202ENST00000568772 240 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 MIR6130-201ENST00000619419 109 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 RNU6-220P-201ENST00000390919 107 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 NDUFB4P10-201ENST00000452541 359 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 CYP2C59P-201ENST00000457790 269 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 SNORA14.1-201ENST00000516113 141 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 RN7SKP5-201ENST00000517045 272 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 MIR3937-201ENST00000580135 106 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 MIR3609-201ENST00000582661 80 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AP001180.6-201ENST00000584918 159 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC069304.3-201ENST00000603938 1084 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AL096803.2-201ENST00000450032 677 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC073544.2-201ENST00000601155 540 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 XIAPP1-201ENST00000603162 600 ntBASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13DQ5THJ4 RNU6-420P-201ENST00000458780 107 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC092757.1-201ENST00000467293 467 ntBASIC0.01□□□□□ -2.41
VPS13DQ5THJ4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms