Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 FCF1P8-201ENST00000510322 597 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC011352.1-201ENST00000512300 793 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 SNORA40.12-201ENST00000516329 111 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 RNU6-572P-201ENST00000516724 80 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 RNU6-685P-201ENST00000517088 95 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AP005435.4-201ENST00000529514 284 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 HIF1AP1-201ENST00000553642 175 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 ZNF519P2-201ENST00000557032 169 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AL157871.3-201ENST00000557231 293 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 AL591516.1-201ENST00000611326 274 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 uc_338.1-201ENST00000612113 180 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 UCA1.1-201ENST00000620952 75 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 YWHAEP7-203ENST00000622054 312 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 ASNSP3-201ENST00000451989 1306 ntBASIC2.67□□□□□ -1.98
PDLIM3Q53GG5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 Y_RNA.33-201ENST00000362591 102 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 SNORD3E-201ENST00000362899 217 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 Y_RNA.238-201ENST00000364441 102 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 Y_RNA.402-201ENST00000383972 102 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 SNORA26.7-201ENST00000391288 122 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 MIR887-201ENST00000401258 79 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL356057.2-201ENST00000403318 432 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 RNU2-25P-201ENST00000411041 191 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL353729.1-201ENST00000425044 720 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 RPL7P37-201ENST00000425095 738 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 TIMM9P3-201ENST00000428659 274 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 MTND3P21-201ENST00000433774 331 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 RPL21P2-201ENST00000440049 481 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 RPL36AP51-201ENST00000487216 318 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC110794.1-201ENST00000505816 425 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 SEM1P1-201ENST00000506694 209 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 MTCO3P9-201ENST00000506989 781 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AP003122.3-201ENST00000526316 255 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC084851.1-201ENST00000529105 249 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC005476.1-201ENST00000554427 397 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL391261.3-201ENST00000557194 520 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 MIR548AC-201ENST00000585049 88 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC005498.1-201ENST00000592125 465 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AP000907.4-201ENST00000604143 237 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC092794.1-201ENST00000612734 582 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 DUSP12P1-201ENST00000612874 516 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 U6atac.1-201ENST00000616025 117 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 U4.5-201ENST00000617137 123 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC018692.3-201ENST00000623929 123 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 AL359693.1-201ENST00000614959 2407 ntBASIC2.66□□□□□ -1.98
PDLIM3Q53GG5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
PDLIM3Q53GG5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PDLIM3Q53GG5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PDLIM3Q53GG5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PDLIM3Q53GG5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 RNU4-82P-201ENST00000362443 140 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 U3.6-201ENST00000363622 211 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 RNU4-66P-201ENST00000365199 138 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 RNU6-715P-201ENST00000365204 103 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 SNORD17-201ENST00000390930 237 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 RNU2-29P-201ENST00000410423 189 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 RNA5SP508-201ENST00000411327 119 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 EEF1A1P40-201ENST00000412883 573 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 BX682237.1-201ENST00000415016 335 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 AC003685.2-201ENST00000422795 395 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 SKA2P1-201ENST00000425592 390 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 MTATP6P13-201ENST00000438531 667 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 AC009969.1-201ENST00000438726 172 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.65□□□□□ -1.99
PDLIM3Q53GG5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms