Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B3Q15393 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B3Q15393 Y_RNA.718-201ENST00000517110 102 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B3Q15393 RANP3-201ENST00000530970 276 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B3Q15393 AC093012.1-202ENST00000549403 582 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AF038458.1-201ENST00000588406 262 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC092747.3-201ENST00000603769 301 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AL360085.1-201ENST00000604713 532 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B3Q15393 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B3Q15393 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SF3B3Q15393 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SF3B3Q15393 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SF3B3Q15393 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.79□□□□□ -1.8
SF3B3Q15393 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B3Q15393 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B3Q15393 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B3Q15393 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B3Q15393 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SF3B3Q15393 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.79□□□□□ -1.8
SF3B3Q15393 RNU6-50P-201ENST00000362356 103 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 SNORA23-201ENST00000365128 182 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.79□□□□□ -1.8
SF3B3Q15393 NDUFS5P1-201ENST00000405668 289 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AL031121.1-201ENST00000406553 254 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 MIR548P-201ENST00000408336 84 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.79□□□□□ -1.8
SF3B3Q15393 MTCO2P27-201ENST00000420740 428 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 MTND2P23-201ENST00000422990 651 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 PPP1R11P2-201ENST00000423543 382 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 BRK1P2-201ENST00000442875 223 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.79□□□□□ -1.8
SF3B3Q15393 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.79□□□□□ -1.8
SF3B3Q15393 AC117440.1-201ENST00000474107 571 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 RPL7P43-201ENST00000478876 753 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.79□□□□□ -1.8
SF3B3Q15393 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.79□□□□□ -1.8
SF3B3Q15393 RNU6-1170P-201ENST00000515974 106 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 RNU1-61P-201ENST00000516107 151 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 RNA5SP468-201ENST00000516782 93 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 SNORA31.20-201ENST00000517111 133 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 SCARNA20.6-201ENST00000517251 106 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AP006587.4-201ENST00000526053 529 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AP005639.2-201ENST00000527592 928 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.79□□□□□ -1.8
SF3B3Q15393 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.79□□□□□ -1.8
SF3B3Q15393 AP000763.2-201ENST00000540641 163 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC126177.3-201ENST00000551839 688 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AL162730.1-201ENST00000605734 292 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC099778.2-201ENST00000610904 211 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC012409.4-201ENST00000612923 249 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC103705.1-201ENST00000619013 241 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AC007998.5-201ENST00000622938 237 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 AL359757.2-201ENST00000624309 274 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 MTND4LP32-201ENST00000636111 270 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SF3B3Q15393 AC007496.3-201ENST00000624987 3443 ntBASIC3.79□□□□□ -1.8
SF3B3Q15393 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B3Q15393 MTND4P27-201ENST00000450813 1354 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.78□□□□□ -1.8
SF3B3Q15393 AC073325.2-201ENST00000339545 159 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU6-254P-201ENST00000363377 107 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 Y_RNA.128-201ENST00000363391 112 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 SNORA5B-201ENST00000363786 132 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 Y_RNA.212-201ENST00000364177 102 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU6-474P-201ENST00000384243 107 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 SNORA48.8-201ENST00000391324 134 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B3Q15393 EIF4E2P1-201ENST00000393781 255 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 MIR548F5-201ENST00000408421 86 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU2-43P-201ENST00000410306 190 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RN7SKP158-201ENST00000410453 326 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.78□□□□□ -1.8
SF3B3Q15393 AL135938.1-201ENST00000443141 297 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 NIPA2P5-201ENST00000452282 464 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU7-152P-201ENST00000458982 64 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.78□□□□□ -1.8
SF3B3Q15393 AC005741.1-201ENST00000511094 432 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU6-189P-201ENST00000516120 101 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU6-123P-201ENST00000516163 102 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU6-256P-201ENST00000516747 97 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 RNU6-566P-201ENST00000516790 107 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.78□□□□□ -1.8
SF3B3Q15393 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.78□□□□□ -1.8
SF3B3Q15393 RPL23AP84-201ENST00000571193 464 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 MIR4425-201ENST00000580572 84 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 MIR3672-201ENST00000584290 82 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 DPPA3P3-201ENST00000603842 430 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AC006023.1-201ENST00000603944 259 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AL670379.10-201ENST00000604330 253 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AP001330.4-201ENST00000604350 154 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AL670379.9-201ENST00000605428 253 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 AL627309.6-201ENST00000606857 840 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 SNORA50A-202ENST00000629536 136 ntBASIC3.78□□□□□ -1.8
SF3B3Q15393 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B3Q15393 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms