Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL591212.2-201ENST00000433923 257 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC119618.1-201ENST00000434191 222 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMGCS1Q01581 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC096638.1-201ENST00000444678 216 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 AL121769.1-201ENST00000469473 401 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 TRBV1-201ENST00000476502 284 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 RAP1BP2-201ENST00000478270 544 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 Y_RNA.689-201ENST00000516589 107 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC009902.1-201ENST00000519351 183 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC060788.1-201ENST00000521318 469 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AP005902.1-201ENST00000521358 186 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC011979.2-201ENST00000527568 352 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 OR5B19P-201ENST00000531766 928 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC010186.2-204ENST00000537668 439 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC024619.4-201ENST00000580924 316 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 NIFKP6-201ENST00000598115 845 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AP002360.4-201ENST00000606980 481 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC022893.3-201ENST00000607665 437 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC012360.2-201ENST00000609349 391 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC091304.9-201ENST00000612091 226 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC091931.1-201ENST00000623488 728 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 FRG1KP-201ENST00000623592 341 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 MIR3199-2-201ENST00000636243 86 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGCS1Q01581 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 U8.2-201ENST00000363156 134 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 Z98749.2-208ENST00000381646 500 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 SNORA70B-201ENST00000384210 135 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 RNU5A-2P-201ENST00000384337 116 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 Y_RNA.534-201ENST00000384599 112 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGCS1Q01581 OR51A5P-201ENST00000415429 942 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AL109913.1-201ENST00000421173 514 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 HMGN2P10-201ENST00000448085 265 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 RNU6-953P-201ENST00000459154 107 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 RPL9P6-201ENST00000492764 598 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 SNORA31.6-201ENST00000516241 130 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 Y_RNA.672-201ENST00000516289 104 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 RNU6-143P-201ENST00000516942 93 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 RNU2-46P-201ENST00000517038 113 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 RNU6-1220P-201ENST00000517126 108 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC084851.1-201ENST00000529105 249 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC006199.1-201ENST00000548728 219 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 MRPS36P5-201ENST00000551909 298 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 NACAP3-201ENST00000552100 481 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 AL589743.7-201ENST00000612637 233 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 AL512643.1-201ENST00000635735 524 ntBASIC1.96□□□□□ -2.1
HMGCS1Q01581 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGCS1Q01581 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGCS1Q01581 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HMGCS1Q01581 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCS1Q01581 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGCS1Q01581 HSPE1P11-201ENST00000339579 310 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 SNORA67.3-201ENST00000384366 140 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 SNORA51.11-201ENST00000384442 131 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 SNORA26.8-201ENST00000391306 124 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RN7SKP32-201ENST00000410167 303 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 HMGB3P2-201ENST00000411913 584 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 NPM1P11-201ENST00000417106 855 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 RPS6P15-201ENST00000431996 751 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC104850.1-201ENST00000435940 476 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 MTND1P26-201ENST00000440488 538 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 USP9YP15-201ENST00000442391 422 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 MTND6P13-201ENST00000443510 523 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 DYNLL1P5-201ENST00000467158 270 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 MTND3P7-201ENST00000474435 343 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms