Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 MIR95-201ENST00000385072 81 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 U8.14-201ENST00000390843 143 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 SNORA67.5-201ENST00000391036 107 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCNA1P78396 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC127391.1-201ENST00000411737 98 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 MTCO2P8-201ENST00000412213 658 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.1□□□□□ -2.07
CCNA1P78396 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.1□□□□□ -2.07
CCNA1P78396 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCNA1P78396 RSU1P2-202ENST00000437884 485 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC091951.3-201ENST00000504093 246 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC091965.2-201ENST00000512324 613 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 RNU6-250P-201ENST00000516958 103 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 SNORA48.11-201ENST00000517015 89 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 ACA59.2-201ENST00000517061 156 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.1□□□□□ -2.07
CCNA1P78396 OR5AQ1P-201ENST00000527596 927 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.1□□□□□ -2.07
CCNA1P78396 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.1□□□□□ -2.07
CCNA1P78396 AC026271.5-201ENST00000577873 130 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 MTCO2P2-201ENST00000591258 225 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AL031274.2-201ENST00000599419 203 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC112220.3-201ENST00000605502 502 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC092953.2-201ENST00000608000 699 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC090970.3-201ENST00000612566 866 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AP000484.1-201ENST00000620067 1252 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 AC138627.2-201ENST00000624202 601 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.1□□□□□ -2.07
CCNA1P78396 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCNA1P78396 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 MIR1294-201ENST00000408503 142 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 RNU6-757P-201ENST00000410334 100 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.09□□□□□ -2.07
CCNA1P78396 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.09□□□□□ -2.07
CCNA1P78396 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.09□□□□□ -2.07
CCNA1P78396 TXNL1P1-201ENST00000429528 554 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.09□□□□□ -2.07
CCNA1P78396 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 AC108059.3-201ENST00000456388 214 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.09□□□□□ -2.07
CCNA1P78396 AC116655.1-201ENST00000508324 901 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 AC117532.1-201ENST00000514638 323 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 Y_RNA.673-201ENST00000516306 88 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.09□□□□□ -2.07
CCNA1P78396 RNU6-88P-201ENST00000606801 100 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 AL136370.1-201ENST00000608166 691 ntBASIC2.09□□□□□ -2.07
CCNA1P78396 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.09□□□□□ -2.07
CCNA1P78396 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.09□□□□□ -2.08
CCNA1P78396 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CCNA1P78396 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CCNA1P78396 Z98749.2-208ENST00000381646 500 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.08□□□□□ -2.08
CCNA1P78396 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.08□□□□□ -2.08
CCNA1P78396 AC112771.1-201ENST00000463581 102 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 RPL23AP41-201ENST00000484754 458 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 AC139453.3-201ENST00000493276 369 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 RNU6-64P-201ENST00000517119 105 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
CCNA1P78396 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.08□□□□□ -2.08
CCNA1P78396 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.08□□□□□ -2.08
CCNA1P78396 LINC00933-203ENST00000559812 219 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.08□□□□□ -2.08
CCNA1P78396 VN1R80P-201ENST00000597126 338 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 BNIP3P39-201ENST00000601077 554 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 BNIP3P9-201ENST00000603714 553 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 MIR502-201ENST00000606349 86 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 AC034229.4-201ENST00000607861 441 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 AC096772.1-201ENST00000609146 564 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 ZNF702P-202ENST00000434269 1966 ntBASIC2.08□□□□□ -2.08
CCNA1P78396 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CCNA1P78396 RNU6-817P-201ENST00000391083 104 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCNA1P78396 AL356432.1-201ENST00000405809 419 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.07□□□□□ -2.08
CCNA1P78396 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.07□□□□□ -2.08
CCNA1P78396 XKRYP1-201ENST00000423438 492 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.07□□□□□ -2.08
CCNA1P78396 XKRYP2-201ENST00000432915 492 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.07□□□□□ -2.08
CCNA1P78396 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.07□□□□□ -2.08
CCNA1P78396 RPL23AP3-201ENST00000453844 468 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 DUXAP8-207ENST00000456786 622 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 AC023194.1-201ENST00000493084 308 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 RNU5B-3P-201ENST00000516601 115 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 AC107953.1-201ENST00000522216 297 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 DEFB108A-201ENST00000530110 222 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 RPS3AP4-201ENST00000555161 764 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.07□□□□□ -2.08
CCNA1P78396 AL049838.1-201ENST00000563647 981 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 MIR4255-201ENST00000579351 72 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 MIR4781-201ENST00000585250 76 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 AC097478.2-201ENST00000610572 514 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 MIR8081-201ENST00000611533 95 ntBASIC2.07□□□□□ -2.08
CCNA1P78396 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 412.2 ms