Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.94□□□□□ -1.94
RPS3AP61247 AC093788.1-201ENST00000609356 927 ntBASIC2.94□□□□□ -1.94
RPS3AP61247 SCARNA17.4-201ENST00000614296 143 ntBASIC2.94□□□□□ -1.94
RPS3AP61247 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.94□□□□□ -1.94
RPS3AP61247 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.94□□□□□ -1.94
RPS3AP61247 AC098679.4-201ENST00000624241 654 ntBASIC2.94□□□□□ -1.94
RPS3AP61247 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.94□□□□□ -1.94
RPS3AP61247 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.94□□□□□ -1.94
RPS3AP61247 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPS3AP61247 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPS3AP61247 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPS3AP61247 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPS3AP61247 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPS3AP61247 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPS3AP61247 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPS3AP61247 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPS3AP61247 RNU1-70P-201ENST00000362618 164 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 SNORA69-201ENST00000383895 132 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 MIR147B-201ENST00000390185 80 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 SNORA16.2-201ENST00000390991 127 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AL513475.1-201ENST00000406602 315 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AL606923.1-201ENST00000406616 190 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 RNU2-3P-201ENST00000410144 191 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.93□□□□□ -1.94
RPS3AP61247 ATP5C1P1-201ENST00000441945 895 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.93□□□□□ -1.94
RPS3AP61247 Z96811.1-201ENST00000445880 108 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 HIGD1AP2-201ENST00000446367 280 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.93□□□□□ -1.94
RPS3AP61247 AC109925.1-201ENST00000478069 331 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.93□□□□□ -1.94
RPS3AP61247 RNU2-69P-201ENST00000516061 100 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.93□□□□□ -1.94
RPS3AP61247 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 MTND4P7-201ENST00000523876 130 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AP004607.1-201ENST00000524456 203 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.93□□□□□ -1.94
RPS3AP61247 AC005476.1-201ENST00000554427 397 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 ZNF519P2-201ENST00000557032 169 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AC027807.1-201ENST00000559921 996 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 MTCO3P23-201ENST00000561363 289 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 AC025678.1-201ENST00000567861 338 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 MIR3941-201ENST00000582572 103 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AL137843.1-201ENST00000605078 385 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AC019159.1-201ENST00000605094 187 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 AL591516.1-201ENST00000611326 274 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 uc_338.14-201ENST00000613162 166 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 AL031601.2-202ENST00000622650 282 ntBASIC2.93□□□□□ -1.94
RPS3AP61247 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.93□□□□□ -1.94
RPS3AP61247 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPS3AP61247 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPS3AP61247 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RPS3AP61247 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPS3AP61247 AC026241.1-201ENST00000517873 2142 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 Y_RNA.399-201ENST00000383955 105 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 Y_RNA.480-201ENST00000384364 102 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 RNU6-1215P-201ENST00000384441 102 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 RPL17P50-201ENST00000396131 546 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 BTF3P7-201ENST00000407097 488 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 CYCSP33-201ENST00000414485 327 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.92□□□□□ -1.94
RPS3AP61247 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.92□□□□□ -1.94
RPS3AP61247 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.92□□□□□ -1.94
RPS3AP61247 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.92□□□□□ -1.94
RPS3AP61247 PRPS1P1-201ENST00000445305 876 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 BX510359.1-201ENST00000456973 237 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 AC006026.2-201ENST00000457376 180 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 RPL23AP11-201ENST00000475260 469 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.92□□□□□ -1.94
RPS3AP61247 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.92□□□□□ -1.94
RPS3AP61247 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.92□□□□□ -1.94
RPS3AP61247 RNU6-835P-201ENST00000516974 104 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.92□□□□□ -1.94
RPS3AP61247 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.92□□□□□ -1.94
RPS3AP61247 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.92□□□□□ -1.94
RPS3AP61247 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.92□□□□□ -1.94
RPS3AP61247 MIR4424-201ENST00000585257 86 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 AF250324.2-201ENST00000608299 610 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 uc_338.34-201ENST00000617467 174 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 AC010378.1-201ENST00000619270 362 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 MIR7515-201ENST00000637837 67 ntBASIC2.92□□□□□ -1.94
RPS3AP61247 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RPS3AP61247 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPS3AP61247 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPS3AP61247 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPS3AP61247 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
RPS3AP61247 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.91□□□□□ -1.94
RPS3AP61247 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RPS3AP61247 Y_RNA.372-201ENST00000365599 102 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms