Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 Y_RNA.720-201ENST00000517166 92 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.13□□□□□ -1.75
MRE11P49959 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.13□□□□□ -1.75
MRE11P49959 LARP7P3-201ENST00000579888 337 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC100830.2-201ENST00000581636 240 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC067852.3-201ENST00000589177 561 ntBASIC4.13□□□□□ -1.75
MRE11P49959 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.13□□□□□ -1.75
MRE11P49959 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.13□□□□□ -1.75
MRE11P49959 AC174048.1-201ENST00000603389 144 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC007938.3-201ENST00000604965 623 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC007619.2-201ENST00000605743 379 ntBASIC4.13□□□□□ -1.75
MRE11P49959 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.13□□□□□ -1.75
MRE11P49959 AC133104.2-201ENST00000615272 193 ntBASIC4.13□□□□□ -1.75
MRE11P49959 MIR8058-201ENST00000615737 89 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AL669831.3-213ENST00000636676 183 ntBASIC4.13□□□□□ -1.75
MRE11P49959 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.13□□□□□ -1.75
MRE11P49959 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
MRE11P49959 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MRE11P49959 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MRE11P49959 MTND4P1-201ENST00000457501 1466 ntBASIC4.12□□□□□ -1.75
MRE11P49959 RNU6-1249P-201ENST00000363237 111 ntBASIC4.12□□□□□ -1.75
MRE11P49959 Y_RNA.148-201ENST00000363557 117 ntBASIC4.12□□□□□ -1.75
MRE11P49959 RNU6-593P-201ENST00000364716 112 ntBASIC4.12□□□□□ -1.75
MRE11P49959 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MRE11P49959 RNU6-434P-201ENST00000384376 107 ntBASIC4.12□□□□□ -1.75
MRE11P49959 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MRE11P49959 CISD1P1-201ENST00000393907 327 ntBASIC4.12□□□□□ -1.75
MRE11P49959 PPP1R11P2-201ENST00000423543 382 ntBASIC4.12□□□□□ -1.75
MRE11P49959 IPO7P1-201ENST00000442031 636 ntBASIC4.12□□□□□ -1.75
MRE11P49959 NEFMP1-201ENST00000443423 1006 ntBASIC4.12□□□□□ -1.75
MRE11P49959 MIR2053-201ENST00000459295 91 ntBASIC4.12□□□□□ -1.75
MRE11P49959 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.12□□□□□ -1.75
MRE11P49959 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.12□□□□□ -1.75
MRE11P49959 RNU2-27P-201ENST00000516185 142 ntBASIC4.12□□□□□ -1.75
MRE11P49959 Y_RNA.689-201ENST00000516589 107 ntBASIC4.12□□□□□ -1.75
MRE11P49959 RNU6-1137P-201ENST00000517073 99 ntBASIC4.12□□□□□ -1.75
MRE11P49959 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.12□□□□□ -1.75
MRE11P49959 AC026333.2-201ENST00000542164 106 ntBASIC4.12□□□□□ -1.75
MRE11P49959 AC010378.1-201ENST00000619270 362 ntBASIC4.12□□□□□ -1.75
MRE11P49959 7SK.10-201ENST00000621414 298 ntBASIC4.12□□□□□ -1.75
MRE11P49959 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.12□□□□□ -1.75
MRE11P49959 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
MRE11P49959 AC007656.2-201ENST00000624902 4547 ntBASIC4.11□□□□□ -1.75
MRE11P49959 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MRE11P49959 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.11□□□□□ -1.75
MRE11P49959 HSPA8P4-201ENST00000511877 1920 ntBASIC4.11□□□□□ -1.75
MRE11P49959 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MRE11P49959 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.11□□□□□ -1.75
MRE11P49959 KPNA2P1-201ENST00000458289 1591 ntBASIC4.11□□□□□ -1.75
MRE11P49959 AP001148.1-201ENST00000624124 2359 ntBASIC4.11□□□□□ -1.75
MRE11P49959 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MRE11P49959 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.11□□□□□ -1.75
MRE11P49959 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MRE11P49959 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
MRE11P49959 Y_RNA.5-201ENST00000362334 102 ntBASIC4.11□□□□□ -1.75
MRE11P49959 SNORA38.1-201ENST00000364172 131 ntBASIC4.11□□□□□ -1.75
MRE11P49959 RNU6-190P-201ENST00000384154 102 ntBASIC4.11□□□□□ -1.75
MRE11P49959 RNU2-43P-201ENST00000410306 190 ntBASIC4.11□□□□□ -1.75
MRE11P49959 AC092809.3-201ENST00000415453 231 ntBASIC4.11□□□□□ -1.75
MRE11P49959 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.11□□□□□ -1.75
MRE11P49959 TBCAP1-201ENST00000436520 327 ntBASIC4.11□□□□□ -1.75
MRE11P49959 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.11□□□□□ -1.75
MRE11P49959 SNRPGP3-201ENST00000469405 227 ntBASIC4.11□□□□□ -1.75
MRE11P49959 RPS4XP13-201ENST00000483219 789 ntBASIC4.11□□□□□ -1.75
MRE11P49959 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.11□□□□□ -1.75
MRE11P49959 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.11□□□□□ -1.75
MRE11P49959 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.11□□□□□ -1.75
MRE11P49959 RNU6-976P-201ENST00000516086 111 ntBASIC4.11□□□□□ -1.75
MRE11P49959 RNU6-1016P-201ENST00000516689 94 ntBASIC4.11□□□□□ -1.75
MRE11P49959 RNU6-579P-201ENST00000516879 102 ntBASIC4.11□□□□□ -1.75
MRE11P49959 RN7SKP295-201ENST00000517264 153 ntBASIC4.11□□□□□ -1.75
MRE11P49959 AC126177.3-201ENST00000551839 688 ntBASIC4.11□□□□□ -1.75
MRE11P49959 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.11□□□□□ -1.75
MRE11P49959 AC099778.2-201ENST00000610904 211 ntBASIC4.11□□□□□ -1.75
MRE11P49959 AL359547.2-201ENST00000615810 418 ntBASIC4.11□□□□□ -1.75
MRE11P49959 AL132822.1-201ENST00000617063 513 ntBASIC4.11□□□□□ -1.75
MRE11P49959 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.11□□□□□ -1.75
MRE11P49959 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.11□□□□□ -1.75
MRE11P49959 AF127577.6-201ENST00000623352 2191 ntBASIC4.11□□□□□ -1.75
MRE11P49959 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MRE11P49959 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.1□□□□□ -1.75
MRE11P49959 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.1□□□□□ -1.75
MRE11P49959 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRE11P49959 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRE11P49959 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.1□□□□□ -1.75
MRE11P49959 FTLP6-201ENST00000355274 422 ntBASIC4.1□□□□□ -1.75
MRE11P49959 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.1□□□□□ -1.75
MRE11P49959 RNU6-1115P-201ENST00000362490 106 ntBASIC4.1□□□□□ -1.75
MRE11P49959 RNU6-1309P-201ENST00000363305 108 ntBASIC4.1□□□□□ -1.75
MRE11P49959 RNU6-1040P-201ENST00000383974 107 ntBASIC4.1□□□□□ -1.75
MRE11P49959 RNU6-128P-201ENST00000383976 107 ntBASIC4.1□□□□□ -1.75
MRE11P49959 RNU6-14P-201ENST00000384630 106 ntBASIC4.1□□□□□ -1.75
MRE11P49959 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRE11P49959 AL139039.1-201ENST00000401900 692 ntBASIC4.1□□□□□ -1.75
MRE11P49959 U3.39-201ENST00000408569 239 ntBASIC4.1□□□□□ -1.75
MRE11P49959 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.1□□□□□ -1.75
MRE11P49959 AL591704.1-201ENST00000432574 275 ntBASIC4.1□□□□□ -1.75
MRE11P49959 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.1□□□□□ -1.75
MRE11P49959 AL357552.1-201ENST00000445254 415 ntBASIC4.1□□□□□ -1.75
MRE11P49959 AL035666.1-201ENST00000446195 348 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms