Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
PRIM1P49642 AL136164.3-201ENST00000624429 3978 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PRIM1P49642 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PRIM1P49642 AL109809.4-201ENST00000603520 2185 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 AL079305.1-201ENST00000623159 3008 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
PRIM1P49642 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PRIM1P49642 RNU6-213P-201ENST00000384051 104 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 RNU6-1145P-201ENST00000384246 107 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.9□□□□□ -1.46
PRIM1P49642 NDUFB4P7-201ENST00000423198 363 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 AC022795.1-201ENST00000473808 480 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 RPS27P26-201ENST00000494583 239 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 AC023632.4-201ENST00000517783 191 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 RPL23AP53-201ENST00000521854 457 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.9□□□□□ -1.46
PRIM1P49642 MIR3158-1-201ENST00000583596 81 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 AC024153.1-201ENST00000603103 365 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 AC006133.1-201ENST00000617106 264 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.9□□□□□ -1.46
PRIM1P49642 ZNF204P-201ENST00000416749 2397 ntBASIC5.9□□□□□ -1.46
PRIM1P49642 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.9□□□□□ -1.46
PRIM1P49642 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PRIM1P49642 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PRIM1P49642 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PRIM1P49642 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PRIM1P49642 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRIM1P49642 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PRIM1P49642 Y_RNA.238-201ENST00000364441 102 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 RNA5SP283-201ENST00000365604 119 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 RNU6-211P-201ENST00000384047 107 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.89□□□□□ -1.47
PRIM1P49642 PPIAP31-201ENST00000405422 495 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 MTHFD2P2-201ENST00000407725 247 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.89□□□□□ -1.47
PRIM1P49642 AC091390.3-201ENST00000426478 338 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 CYCSP32-201ENST00000440548 321 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.89□□□□□ -1.47
PRIM1P49642 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.89□□□□□ -1.47
PRIM1P49642 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PRIM1P49642 snoU13.22-201ENST00000459428 104 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 AC020890.1-201ENST00000491837 504 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.89□□□□□ -1.47
PRIM1P49642 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.89□□□□□ -1.47
PRIM1P49642 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 MIR4444-1-201ENST00000581696 74 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 MIR4444-2-201ENST00000584390 74 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.89□□□□□ -1.47
PRIM1P49642 AC022441.3-201ENST00000605737 136 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 AC099669.2-201ENST00000616549 437 ntBASIC5.89□□□□□ -1.47
PRIM1P49642 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.89□□□□□ -1.47
PRIM1P49642 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRIM1P49642 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.89□□□□□ -1.47
PRIM1P49642 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRIM1P49642 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PRIM1P49642 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRIM1P49642 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRIM1P49642 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PRIM1P49642 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRIM1P49642 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRIM1P49642 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PRIM1P49642 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
PRIM1P49642 MIR383-201ENST00000362257 73 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.88□□□□□ -1.47
PRIM1P49642 MIR10B-201ENST00000385011 110 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 RNU6-159P-201ENST00000391080 106 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 RNA5SP296-201ENST00000410523 111 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 RNU2-68P-201ENST00000410878 191 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 RN7SL542P-201ENST00000467147 294 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 RNA5SP165-201ENST00000517142 115 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 AP004607.1-201ENST00000524456 203 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRIM1P49642 AL391261.3-201ENST00000557194 520 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.88□□□□□ -1.47
PRIM1P49642 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.88□□□□□ -1.47
PRIM1P49642 MIR5695-201ENST00000579717 85 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 MIR548X2-201ENST00000579776 100 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 AC084757.4-201ENST00000616350 526 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 MIR8069-1-201ENST00000616627 86 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 MIR8069-2-201ENST00000621412 86 ntBASIC5.88□□□□□ -1.47
PRIM1P49642 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRIM1P49642 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRIM1P49642 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PRIM1P49642 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.87□□□□□ -1.47
PRIM1P49642 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.87□□□□□ -1.47
PRIM1P49642 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRIM1P49642 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.87□□□□□ -1.47
PRIM1P49642 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRIM1P49642 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRIM1P49642 MIR331-201ENST00000362302 94 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 RNU6-834P-201ENST00000362367 110 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 MIR329-1-201ENST00000385028 80 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 MIR670-201ENST00000390142 98 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 RNU6-257P-201ENST00000410238 98 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 RPS4XP22-201ENST00000480755 780 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 YWHAEP4-201ENST00000505390 198 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.87□□□□□ -1.47
PRIM1P49642 RNU6-426P-201ENST00000516464 97 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 SNORD116-25-201ENST00000516517 92 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms